EnhancerDB
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  3. rs946673[chr1:24611688]
Enhancers that have rs946673[chr1:24611688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs946673[chr1:24611688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24611674 24611688 TLX1 JASPAR yes 27495807
chr1 24611675 24611689 TLX1 JASPAR yes 27495808
chr1 24611683 24611689 NFIC JASPAR yes 27495809
chr1 24611685 24611689 H1TF2 TRANSFAC yes 27495810
chr1 24611685 24611689 NFE TRANSFAC yes 27495811
chr1 24611685 24611689 SRF TRANSFAC yes 27495812
Genes associated with rs946673[chr1:24611688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More