EnhancerDB
  1. Home
  2. SNP
  3. rs9472004[chr6:43054101]
Enhancers that have rs9472004[chr6:43054101]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43045645 43067063 enh23249
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs9472004[chr6:43054101]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43054089 43054103 PLAG1 JASPAR yes 101751917
chr6 43054100 43054105 SP1 TRANSFAC yes 101751918
chr6 43054101 43054112 GCM1 JASPAR yes 101751919
Genes associated with rs9472004[chr6:43054101], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More