EnhancerDB
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  3. rs9486940[chr6:109050378]
Enhancers that have rs9486940[chr6:109050378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109044985 109078935 enh23481
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs9486940[chr6:109050378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109050365 109050380 SOX21 JASPAR yes 104198358
chr6 109050372 109050391 RFX2 JASPAR yes 104198359
chr6 109050374 109050385 DMRT3 JASPAR yes 104198360
chr6 109050376 109050392 RFX5 JASPAR yes 104198361
Genes associated with rs9486940[chr6:109050378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More