EnhancerDB
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  3. rs9651023[chr1:19767769]
Enhancers that have rs9651023[chr1:19767769]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9651023[chr1:19767769]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19767763 19767775 PKNOX1 JASPAR yes 27190657
chr1 19767763 19767775 PKNOX2 JASPAR yes 27190658
chr1 19767763 19767775 TGIF2 JASPAR yes 27190659
chr1 19767764 19767773 SNAI2 JASPAR yes 27190660
chr1 19767764 19767774 ID4 JASPAR yes 27190661
Genes associated with rs9651023[chr1:19767769], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 20487746 20503917 - PLA2G2C ENSG00000187980.6 20503917 719977 Breast 0.402105 275