EnhancerDB
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  3. rs965530[chr17:853694]
Enhancers that have rs965530[chr17:853694]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs965530[chr17:853694]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 853681 853701 RREB1 JASPAR yes 52644196
chr17 853687 853702 RUNX2 JASPAR yes 52644197
chr17 853688 853702 PLAG1 JASPAR yes 52644198
Genes associated with rs965530[chr17:853694], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More