EnhancerDB
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  3. rs967529[chr1:39596109]
Enhancers that have rs967529[chr1:39596109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs967529[chr1:39596109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39595826 39596828 ZNF274 GTRD no Bone Marrow (K562) 107802888
chr1 39596100 39596110 SREBF1 JASPAR yes 28255372
chr1 39596104 39596125 IRF1 JASPAR yes 28255373
chr1 39596106 39596121 STAT2 JASPAR yes 28255374
chr1 39596107 39596121 STAT1 JASPAR yes 28255375
chr1 39596108 39596120 IRF1 JASPAR yes 28255376
chr1 39596108 39596122 IRF7 JASPAR yes 28255377
chr1 39596108 39596122 IRF8 JASPAR yes 28255378
chr1 39596108 39596123 IRF9 JASPAR yes 28255379
Genes associated with rs967529[chr1:39596109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More