EnhancerDB
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  3. rs9701228[chr1:235154351]
Enhancers that have rs9701228[chr1:235154351]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs9701228[chr1:235154351]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235153896 235154426 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403166
chr1 235154343 235154355 PKNOX2 JASPAR yes 36343099
chr1 235154344 235154353 SNAI2 JASPAR yes 36343100
chr1 235154344 235154354 ID4 JASPAR yes 36343101
chr1 235154344 235154354 TCF3 JASPAR yes 36343102
chr1 235154344 235154354 TCF4 JASPAR yes 36343103
Genes associated with rs9701228[chr1:235154351], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More