EnhancerDB
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  3. rs9788988[chr17:788885]
Enhancers that have rs9788988[chr17:788885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs9788988[chr17:788885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 788878 788896 ESR1 JASPAR yes 52636942
chr17 788884 788893 HIC2 JASPAR yes 52636943
chr17 788885 788904 CTCF JASPAR yes 52636944
Genes associated with rs9788988[chr17:788885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More