EnhancerDB
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  3. rs9852396[chr3:58051540]
Enhancers that have rs9852396[chr3:58051540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9852396[chr3:58051540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58051530 58051545 JUND JASPAR yes 2671834
chr3 58051531 58051544 JUN JASPAR yes 2671835
chr3 58051536 58051551 RUNX2 JASPAR yes 2671836
chr3 58051538 58051558 RREB1 JASPAR yes 2671837
chr3 58051539 58051549 TFE3 JASPAR yes 2671838
chr3 58051539 58051549 TFEB JASPAR yes 2671839
chr3 58051539 58051549 TFEC JASPAR yes 2671840
chr3 58051539 58051550 USF1 JASPAR yes 2671841
Genes associated with rs9852396[chr3:58051540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More