EnhancerDB
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  3. rs9853968[chr3:57055271]
Enhancers that have rs9853968[chr3:57055271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57012585 57055453 enh7240
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs9853968[chr3:57055271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57055252 57055273 IRF1 JASPAR yes 2623831
chr3 57055256 57055271 FOXP1 JASPAR yes 2623832
chr3 57055258 57055273 FOXP1 JASPAR yes 2623833
chr3 57055258 57055279 IRF1 JASPAR yes 2623834
chr3 57055259 57055280 IRF1 JASPAR yes 2623835
chr3 57055261 57055272 FOXP2 JASPAR yes 2623836
chr3 57055263 57055275 IRF1 JASPAR yes 2623837
chr3 57055263 57055278 STAT2 JASPAR yes 2623838
chr3 57055264 57055279 MEF2C JASPAR yes 2623839
chr3 57055270 57055282 TAL1 JASPAR yes 2623840
Genes associated with rs9853968[chr3:57055271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More