EnhancerDB
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  3. rs9859627[chr3:58040389]
Enhancers that have rs9859627[chr3:58040389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9859627[chr3:58040389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58040371 58040391 PPARG JASPAR yes 2670263
chr3 58040388 58040401 DUXA JASPAR yes 2670265
chr3 58040389 58040400 DUX4 JASPAR yes 2670266
chr3 58040389 58040400 PHOX2A JASPAR yes 2670267
chr3 58040389 58040400 PROP1 JASPAR yes 2670268
Genes associated with rs9859627[chr3:58040389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More