EnhancerDB
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  3. rs9896449[chr17:80449554]
Enhancers that have rs9896449[chr17:80449554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs9896449[chr17:80449554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80448031 80451023 TCF7L2 GTRD no Colon (HCT116) 21800291
chr17 80448126 80450222 TCF7L2 GTRD no Colon (HCT116) 21800292
chr17 80448893 80450195 TCF7L2 GTRD no Colon (HCT116) 21800298
chr17 80448905 80452854 TCF7L2 GTRD no Colon (HCT116) 21800299
chr17 80448941 80449919 TCF7L2 GTRD no Colon (HCT116) 21800300
chr17 80449126 80449915 ZNF143 GTRD no Epithelial (MCF-7) 21800302
chr17 80449312 80450008 ZNF274 GTRD no Bone Marrow (K562) 21800303
chr17 80449531 80451615 ZNF274 GTRD no Cervix (HeLa-S3) 21800304
chr17 80449541 80449557 T JASPAR yes 56366991
chr17 80449548 80449558 SREBF1 JASPAR yes 56366992
chr17 80449550 80449563 NR2F1 JASPAR yes 56366993
chr17 80449552 80449563 ESRRA JASPAR yes 56366994
chr17 80449552 80449563 ESRRB JASPAR yes 56366995
chr17 80449553 80449561 NR4A2 JASPAR yes 56366996
chr17 80449554 80449564 RORA JASPAR yes 56366997
Genes associated with rs9896449[chr17:80449554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More