EnhancerDB
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  3. rs9896742[chr17:57826530]
Enhancers that have rs9896742[chr17:57826530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs9896742[chr17:57826530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57826520 57826531 FOS JASPAR yes 55076631
chr17 57826520 57826540 PPARG JASPAR yes 55076632
chr17 57826523 57826543 ESR1 JASPAR yes 55076633
Genes associated with rs9896742[chr17:57826530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 58029601 58042122 - RNFT1 ENSG00000189050.10 58042122 203071 Thyroid 1.62576e-06 16110