EnhancerDB
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  3. rs9898429[chr17:80480652]
Enhancers that have rs9898429[chr17:80480652]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9898429[chr17:80480652]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80480636 80480656 PPARG JASPAR yes 56369697
chr17 80480639 80480654 ESR2 JASPAR yes 56369698
chr17 80480644 80480657 NR2F1 JASPAR yes 56369699
chr17 80480647 80480655 NR4A2 JASPAR yes 56369700
Genes associated with rs9898429[chr17:80480652], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More