EnhancerDB
  1. Home
  2. SNP
  3. rs9898612[chr17:2779319]
Enhancers that have rs9898612[chr17:2779319]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs9898612[chr17:2779319]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2779313 2779323 SP1 JASPAR yes 52780926
chr17 2779315 2779320 SP1 TRANSFAC yes 52780927
chr17 2779315 2779321 SP1 TRANSFAC yes 52780928
chr17 2779315 2779322 SP1 TRANSFAC yes 52780929
Genes associated with rs9898612[chr17:2779319], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More