EnhancerDB
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  3. rs9899609[chr17:55985403]
Enhancers that have rs9899609[chr17:55985403]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9899609[chr17:55985403]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55985393 55985404 NRF1 JASPAR yes 54997601
chr17 55985397 55985406 HIC2 JASPAR yes 54997602
chr17 55985398 55985410 TFAP2A JASPAR yes 54997603
chr17 55985398 55985413 TFAP2A JASPAR yes 54997604
Genes associated with rs9899609[chr17:55985403], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More