EnhancerDB
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  3. rs9901451[chr17:55568689]
Enhancers that have rs9901451[chr17:55568689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 55568668 55569013 vista25236
VISTA
Transcript factors that have rs9901451[chr17:55568689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55568528 55568863 SOX2 GTRD no Neural Stem Cells (H9) 21773609
chr17 55568528 55568863 SOX2 GTRD no Neural Stem Cells (H9) 108274158
chr17 55568688 55568698 TBX21 JASPAR yes 21259813
chr17 55568688 55568698 TBX21 JASPAR yes 54961027
chr17 55568688 55568699 TBX2 JASPAR yes 21259814
chr17 55568688 55568699 TBX2 JASPAR yes 54961028
chr17 55568688 55568701 EOMES JASPAR yes 21259815
chr17 55568688 55568701 EOMES JASPAR yes 54961029
Genes associated with rs9901451[chr17:55568689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More