EnhancerDB
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  3. rs990363[chr1:172325029]
Enhancers that have rs990363[chr1:172325029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs990363[chr1:172325029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172325024 172325039 RUNX2 JASPAR yes 33125261
chr1 172325025 172325035 RUNX3 JASPAR yes 33125262
chr1 172325025 172325036 RUNX1 JASPAR yes 33125263
Genes associated with rs990363[chr1:172325029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More