EnhancerDB
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  3. rs9904374[chr17:57908096]
Enhancers that have rs9904374[chr17:57908096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57900714 57910675 enh4507
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs9904374[chr17:57908096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57907877 57908582 TCF7L2 GTRD no Colon (HCT116) 21776387
chr17 57907877 57908582 TCF7L2 GTRD no Colon (HCT116) 108278233
chr17 57908080 57908096 POU4F3 JASPAR yes 55086762
chr17 57908082 57908546 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21776388
chr17 57908082 57908546 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108278234
chr17 57908093 57908104 HOXC13 JASPAR yes 55086763
Genes associated with rs9904374[chr17:57908096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More