EnhancerDB
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  3. rs9904816[chr17:55550845]
Enhancers that have rs9904816[chr17:55550845]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs9904816[chr17:55550845]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55550828 55550849 IRF1 JASPAR yes 54958762
chr17 55550829 55550850 IRF1 JASPAR yes 54958763
chr17 55550833 55550845 IRF1 JASPAR yes 54958765
chr17 55550833 55550848 STAT2 JASPAR yes 54958766
chr17 55550834 55550849 FOXP1 JASPAR yes 54958767
chr17 55550835 55550846 FOXA1 JASPAR yes 54958768
chr17 55550836 55550847 FOXC1 JASPAR yes 54958769
chr17 55550836 55550848 FOXC2 JASPAR yes 54958770
chr17 55550837 55550848 FOXP2 JASPAR yes 54958771
chr17 55550838 55550846 FOXO3 JASPAR yes 54958772
chr17 55550839 55550848 SRY JASPAR yes 54958773
chr17 55550839 55550850 FOXA1 JASPAR yes 54958774
chr17 55550840 55550852 FOXC2 JASPAR yes 54958775
chr17 55550841 55550853 FOXI1 JASPAR yes 54958776
chr17 55550843 55550863 TP53 JASPAR yes 54958777
Genes associated with rs9904816[chr17:55550845], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More