EnhancerDB
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Enhancers that have rs9936403[chr16:88840662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs9936403[chr16:88840662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 21736969
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223440
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223441
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223442
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223443
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 21736971
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223445
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223446
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223447
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223448
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 21736980
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223459
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223460
chr16 88837083 88844010 ZNF143 GTRD no Epithelial (MCF-7) 108223461
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 21736982
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 108223463
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 108223464
chr16 88837097 88841116 ZNF143 GTRD no Epithelial (MCF-7) 108223465
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 21736984
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223467
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223468
chr16 88837118 88842457 ZNF143 GTRD no Epithelial (MCF-7) 108223469
chr16 88837828 88841387 ZNF143 GTRD no Epithelial (MCF-7) 21737045
chr16 88837828 88841387 ZNF143 GTRD no Epithelial (MCF-7) 108223544
chr16 88837828 88841387 ZNF143 GTRD no Epithelial (MCF-7) 108223545
chr16 88838153 88840965 ZNF274 GTRD no Bone Marrow (K562) 21737047
chr16 88838153 88840965 ZNF274 GTRD no Bone Marrow (K562) 108223548
chr16 88838153 88840965 ZNF274 GTRD no Bone Marrow (K562) 108223549
chr16 88838153 88840983 ZNF274 GTRD no Bone Marrow (K562) 21737048
chr16 88838153 88840983 ZNF274 GTRD no Bone Marrow (K562) 108223550
chr16 88838153 88840983 ZNF274 GTRD no Bone Marrow (K562) 108223551
chr16 88839985 88840927 ZNF143 GTRD no Epithelial (MCF-7) 21737156
chr16 88839985 88840927 ZNF143 GTRD no Epithelial (MCF-7) 108223671
chr16 88840021 88840745 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737158
chr16 88840021 88840745 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223673
chr16 88840057 88840745 POLR2A UCSC Txn Factor no Conserved 108223678
chr16 88840077 88840721 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737163
chr16 88840077 88840721 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223679
chr16 88840209 88840759 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737167
chr16 88840209 88840759 GATA2 UCSC Txn Factor no Conserved 108223683
chr16 88840209 88840759 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223684
chr16 88840224 88840714 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737168
chr16 88840224 88840714 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223685
chr16 88840242 88840684 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737170
chr16 88840242 88840684 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223687
chr16 88840661 88840672 DMRT3 JASPAR yes 12302920
Genes associated with rs9936403[chr16:88840662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More