EnhancerDB
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Enhancers that regulate SPRTN[ENSG00000010072.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 231366945 231374417 enh43180 231472850 98433
Liver (HepG2) Large Intestine Liver Lung (A549) Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Stomach
chr1 231428201 231428315 vista5522 231472850 44535
VISTA
chr1 231488845 231497150 enh983 231472850 15995
Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (Karpas-422) Spleen Stomach
chr1 231509969 231515358 enh61981 231472850 37119
Esophagus Blood (T-cell) Stomach Blood (GM12878)
chr1 231513422 231513769 vista5523 231472850 40572
VISTA
chr1 231515558 231535204 enh984 231472850 42708
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 231531271 231531676 vista5524 231472850 58421
VISTA
chr1 231531776 231531955 vista5525 231472850 58926
VISTA
chr1 231540925 231559675 enh985 231472850 68075
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Heart
chr1 231564657 231564985 vista5526 231472850 91807
VISTA
Transcript facotrs that regulate SPRTN[ENSG00000010072.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SPRTN[ENSG00000010072.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 231492403 rs2749721 G C 1634 Esophagus 0.000234976 1022331
chr1 231514567 rs2790890 C T 23798 Esophagus 0.0338527 1022476
chr1 231531627 rs480902 T C 40858 Esophagus 0.178679 1022771
chr1 231516034 rs2808587 C T 25265 Heart 0.0233377 1022500
chr1 231169745 rs56355004 T C 303105 Pancreas 0.136393 1021122
chr1 230516577 rs901670 G A 956273 Breast 0.316096 1017386
chr1 231730254 rs11122313 G T 239485 Lung 0.0257386 1024010
chr1 231554993 rs2808616 C G 64224 Adrenal 0.275398 1023034
Details of SPRTN[ENSG00000010072.11]
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Genomic Location chr1:231472850-231490769[+]
TSS 231472850
Gene Name SPRTN
Ensembl ID ENSG00000010072.11
ENTREZID 83932
Uniprot
A0A024R3U2
Q9H040
Protein Name
SprT-like domain-containing protein Spartan
Expression levels of SPRTN[ENSG00000010072.11]
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