EnhancerDB
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Enhancers that regulate SNAPC1[ENSG00000023608.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr14 62124449 62148100 enh3261 62229075 80975
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Stomach
chr14 62129212 62129618 vista18053 62229075 99457
VISTA
chr14 62130240 62130667 vista18054 62229075 98408
VISTA
chr14 62157799 62158071 vista18055 62229075 71004
VISTA
chr14 62166705 62173355 enh3262 62229075 55720
Blood (T-cell) Blood (Karpas-422)
chr14 62170336 62170562 vista18056 62229075 58513
VISTA
chr14 62174445 62187015 enh3263 62229075 42060
Prostate (PC-3) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr14 62211605 62224015 enh3264 62229075 5060
Prostate (PC-3) Lung (PC-9) Astrocyte Blood (OCI-LY7) Colon (HCT116) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9)
chr14 62219407 62219640 vista18057 62229075 9435
VISTA
chr14 62298450 62298645 vista18058 62229075 69375
VISTA
chr14 62302405 62310155 enh75501 62229075 73330
Prostate (PC-3) Cervix (HeLa-S3) Bone (Osteoblast) Muscle (A673) Lung (PC-9)
chr14 62325085 62329495 enh3265 62229075 96010
Neural Stem Cells (H9) Blood (Karpas-422)
Transcript facotrs that regulate SNAPC1[ENSG00000023608.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SNAPC1[ENSG00000023608.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr14 62228299 rs7145164 A G 776 Esophagus 6.13642e-06 3593836
chr14 62228299 rs7145164 A G 776 Esophagus 6.84642e-06 3593836
chr14 61716122 rs149355339 T C 512953 Heart 0.161926 3588551
chr14 62071834 rs76218378 G A,T 157241 Pancreas 0.314067 3592392
chr14 62228299 rs7145164 A G 776 Breast 8.69513e-08 3593836
chr14 62022502 rs17098823 A G 206573 Spleen 0.291978 3591781
chr14 62229113 rs17099207 G A 0 Thyroid 3.46503e-09 3593849
chr14 62228937 rs56971798 T G 138 Lung 9.86698e-09 3593847
Details of SNAPC1[ENSG00000023608.4]
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Genomic Location chr14:62229075-62263146[+]
TSS 62229075
Gene Name SNAPC1
Ensembl ID ENSG00000023608.4
ENTREZID 6617
Uniprot
Q16533
B2RC42
Protein Name
snRNA-activating protein complex subunit 1
Expression levels of SNAPC1[ENSG00000023608.4]
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