EnhancerDB
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Enhancers that regulate CCDC28A[ENSG00000024862.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 138988625 138996675 enh23681 139094657 97982
Placenta Neural Stem Cells (H9)
chr6 138999405 139008735 enh23682 139094657 85922
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Muscle (Myoblast) Pancreas (Panc1)
chr6 139038205 139046335 enh23683 139094657 48322
Astrocyte Placenta Brain (SK-N-MC) Stomach
chr6 139100392 139100553 vista53808 139094657 5735
VISTA
chr6 139120005 139124155 enh97935 139094657 25348
Epithelial (MCF-7)
chr6 139124660 139128864 enh46226 139094657 30003
Muscle (Myotube)
chr6 139133425 139144215 enh23684 139094657 38768
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 139147882 139152172 enh72537 139094657 53225
Neural Stem Cells (H9)
chr6 139152405 139158835 enh100577 139094657 57748
Thyroid Uterus Lung Brain (SK-N-MC)
chr6 139192465 139197324 enh66281 139094657 97808
Heart
Transcript facotrs that regulate CCDC28A[ENSG00000024862.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with CCDC28A[ENSG00000024862.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 138100096 rs112680239 A T 994561 Esophagus 0.164961 9372567
chr6 138856025 rs4507611 A T 238632 Spleen 0.384683 9377894
chr6 139716941 rs9373237 T G 602485 Ovary 0.193253 9383390
chr6 139280550 rs78364003 T C 166094 Lung 0.0324266 9380270
chr6 138467515 rs77206663 C A 627142 Stomach 0.0752612 9375625
Details of CCDC28A[ENSG00000024862.12]
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Genomic Location chr6:139094657-139114456[+]
TSS 139094657
Gene Name CCDC28A
Ensembl ID ENSG00000024862.12
ENTREZID 25901
Uniprot
Q8IWP9
Protein Name
CCDC28A protein
Coiled-coil domain containing 28A/interleukin-22 receptor subunit alpha-2 fusion variant 1
Coiled-coil domain containing 28A/interleukin-22 receptor subunit alpha-2 fusion variant 2
Coiled-coil domain containing 28A/interleukin-22 receptor subunit alpha-2 fusion variant 3
Coiled-coil domain-containing protein 28A
Expression levels of CCDC28A[ENSG00000024862.12]
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