EnhancerDB
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Enhancers that regulate SOX30[ENSG00000039600.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr5 157001390 157002014 vista49816 157098488 96474
VISTA
chr5 157008752 157009437 vista49817 157098488 89051
VISTA
chr5 157009816 157010054 vista49818 157098488 88434
VISTA
chr5 157017733 157042895 enh8820 157098488 55593
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube) Thymus Stomach
chr5 157019708 157019949 vista49819 157098488 78539
VISTA
chr5 157021166 157021781 vista49820 157098488 76707
VISTA
chr5 157022180 157022337 vista49821 157098488 76151
VISTA
chr5 157023315 157023779 vista49822 157098488 74709
VISTA
chr5 157026612 157027036 vista49823 157098488 71452
VISTA
chr5 157029541 157029807 vista49824 157098488 68681
VISTA
chr5 157030326 157030804 vista49825 157098488 67684
VISTA
chr5 157034878 157035003 vista49826 157098488 63485
VISTA
chr5 157038675 157038947 vista49827 157098488 59541
VISTA
chr5 157040513 157041041 vista49828 157098488 57447
VISTA
chr5 157097652 157097963 vista49829 157098488 525
VISTA
chr5 157111645 157115795 enh55556 157098488 13157
Large Intestine
chr5 157134005 157147787 enh38547 157098488 35517
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube)
chr5 157156902 157157206 vista49830 157098488 58414
VISTA
chr5 157168125 157178164 enh38548 157098488 69637
Prostate (PC-3) Astrocyte Bone (Osteoblast) Muscle (Myoblast) Muscle (Myotube) Uterus
chr5 157193238 157197684 enh46001 157098488 94750
Prostate (PC-3) Muscle (Myotube)
Transcript facotrs that regulate SOX30[ENSG00000039600.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr5 157097688 157097697 NKX3-2 JASPAR yes 157098488 791 70747315
chr5 157097736 157097747 TBX20 JASPAR yes 157098488 741 70747316
chr5 157097745 157097748 MYB TRANSFAC yes 157098488 740 70747317
chr5 157097769 157097780 FOXB1 JASPAR yes 157098488 708 70747318
chr5 157097769 157097782 POU3F3 JASPAR yes 157098488 706 70747319
chr5 157097770 157097774 YY1 TRANSFAC yes 157098488 714 70747320
chr5 157097770 157097780 NFATC3 JASPAR yes 157098488 708 70747321
chr5 157097776 157097780 YY1 TRANSFAC yes 157098488 708 70747322
chr5 157097779 157097798 CTCF JASPAR yes 157098488 690 70747323
chr5 157097786 157097806 PPARG JASPAR yes 157098488 682 70747324
chr5 157097786 157097807 IRF1 JASPAR yes 157098488 681 70747325
chr5 157097790 157097795 ETS2 TRANSFAC yes 157098488 693 70747326
chr5 157097790 157097804 STAT1 JASPAR yes 157098488 684 70747327
chr5 157097790 157097805 STAT2 JASPAR yes 157098488 683 70747328
chr5 157097826 157097837 CDX2 JASPAR yes 157098488 651 70747329
chr5 157097827 157097838 HOXC11 JASPAR yes 157098488 650 70747330
chr5 157097827 157097838 HOXD12 JASPAR yes 157098488 650 70747331
chr5 157097828 157097837 CDX1 JASPAR yes 157098488 651 70747332
chr5 157097828 157097838 HOXC10 JASPAR yes 157098488 650 70747333
chr5 157097839 157097852 ELF1 JASPAR yes 157098488 636 70747334
chr5 157097840 157097850 ELK1 JASPAR yes 157098488 638 70747335
chr5 157097840 157097852 ELF1 JASPAR yes 157098488 636 70747336
chr5 157097842 157097851 ELK4 JASPAR yes 157098488 637 70747337
chr5 157097842 157097852 ELK1 JASPAR yes 157098488 636 70747338
chr5 157097842 157097852 ELK3 JASPAR yes 157098488 636 70747339
chr5 157097842 157097852 ERG JASPAR yes 157098488 636 70747340
chr5 157097842 157097852 ETV1 JASPAR yes 157098488 636 70747341
chr5 157097842 157097852 ETV4 JASPAR yes 157098488 636 70747342
chr5 157097842 157097852 ETV5 JASPAR yes 157098488 636 70747343
chr5 157097842 157097852 FEV JASPAR yes 157098488 636 70747344
chr5 157097842 157097852 FLI1 JASPAR yes 157098488 636 70747345
chr5 157097842 157097853 ELK4 JASPAR yes 157098488 635 70747346
chr5 157097844 157097850 ETS1 JASPAR yes 157098488 638 70747347
chr5 157097844 157097850 SPI1 JASPAR yes 157098488 638 70747348
chr5 157097861 157097865 H4TF2 TRANSFAC yes 157098488 623 70747349
chr5 157097865 157097869 YY1 TRANSFAC yes 157098488 619 70747350
chr5 157097876 157097890 STAT1 JASPAR yes 157098488 598 70747351
chr5 157097877 157097891 FOXF2 JASPAR yes 157098488 597 70747352
chr5 157097877 157097892 FOXP1 JASPAR yes 157098488 596 70747353
chr5 157097878 157097889 FOXA1 JASPAR yes 157098488 599 70747354
chr5 157097878 157097893 FOXA1 JASPAR yes 157098488 595 70747355
chr5 157097878 157097899 IRF1 JASPAR yes 157098488 589 70747356
chr5 157097879 157097890 FOXB1 JASPAR yes 157098488 598 70747357
chr5 157097879 157097890 FOXC1 JASPAR yes 157098488 598 70747358
chr5 157097879 157097891 FOXC2 JASPAR yes 157098488 597 70747359
chr5 157097880 157097891 FOXP2 JASPAR yes 157098488 597 70747360
chr5 157097882 157097889 FOXD2 JASPAR yes 157098488 599 70747361
chr5 157097882 157097889 FOXI1 JASPAR yes 157098488 599 70747362
chr5 157097882 157097889 FOXL1 JASPAR yes 157098488 599 70747363
chr5 157097882 157097889 FOXO4 JASPAR yes 157098488 599 70747364
chr5 157097882 157097889 FOXO6 JASPAR yes 157098488 599 70747365
chr5 157097882 157097889 FOXP3 JASPAR yes 157098488 599 70747366
chr5 157097882 157097890 FOXD1 JASPAR yes 157098488 598 70747367
chr5 157097882 157097890 FOXG1 JASPAR yes 157098488 598 70747368
chr5 157097882 157097890 FOXO3 JASPAR yes 157098488 598 70747369
chr5 157097882 157097891 SRY JASPAR yes 157098488 597 70747370
chr5 157097890 157097905 ZIC3 JASPAR yes 157098488 583 70747371
chr5 157097890 157097905 ZIC4 JASPAR yes 157098488 583 70747372
chr5 157097891 157097905 ZIC1 JASPAR yes 157098488 583 70747373
chr5 157097920 157097924 TEAD2 TRANSFAC yes 157098488 564 70747374
chr5 157097920 157097925 TBP TRANSFAC yes 157098488 563 70747375
chr5 157097927 157097942 HNF4G JASPAR yes 157098488 546 70747376
chr5 157097928 157097943 HNF4A JASPAR yes 157098488 545 70747377
chr5 157097932 157097938 SOX10 JASPAR yes 157098488 550 70747378
chr5 157097944 157097955 HOXC13 JASPAR yes 157098488 533 70747379
chr5 157097947 157097950 MYB TRANSFAC yes 157098488 538 70747380
SNPs associated with SOX30[ENSG00000039600.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr5 158017857 rs111416449 G A 919369 Esophagus 0.389624 8648663
chr5 157137925 rs562114519 TGTA T 39437 Esophagus 0.0245311 8643071
chr5 156141605 rs12521174 A G 911082 Spleen 0.139278 8638059
chr5 156505183 rs397716031 CT C 547504 Ovary 0.297074 8639712
chr5 157040002 rs868176 T G 12685 Uterus 0.247004 8642880
Details of SOX30[ENSG00000039600.6]
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Genomic Location chr5:157052687-157098488[-]
TSS 157098488
Gene Name SOX30
Ensembl ID ENSG00000039600.6
ENTREZID 11063
Uniprot
O94993
B4DXW7
Protein Name
Transcription factor SOX-30
Expression levels of SOX30[ENSG00000039600.6]
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