EnhancerDB
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Enhancers that regulate TNC[ENSG00000041982.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr9 117785314 117785612 vista63137 117880536 94924
VISTA
chr9 117829545 117835755 enh78756 117880536 44781
Muscle (A673) Brain (SK-N-MC)
chr9 117829850 117830096 vista63138 117880536 50440
VISTA
chr9 117845711 117845781 vista63139 117880536 34755
VISTA
chr9 117853392 117858548 enh73783 117880536 21988
Neural Stem Cells (H9)
chr9 117858925 117873955 enh42219 117880536 6581
Prostate (PC-3) Brain (SK-N-MC) Esophagus Astrocyte Muscle (A673) Lung (PC-9) Breast Uterus Stomach
chr9 117860552 117860777 vista63140 117880536 19759
VISTA
chr9 117878279 117878434 vista63141 117880536 2102
VISTA
chr9 117883580 117883602 vista63142 117880536 3044
VISTA
chr9 117886925 117891971 enh42220 117880536 6389
Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Muscle (Myoblast) Muscle (Myotube)
chr9 117893025 117898175 enh42221 117880536 12489
Muscle (Myoblast) Astrocyte
chr9 117899267 117899603 vista63143 117880536 18731
VISTA
chr9 117906965 117911135 enh42222 117880536 26429
Astrocyte Prostate (PC-3) Uterus Lung (PC-9)
chr9 117917065 117937757 enh42223 117880536 36529
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
chr9 117942308 117942603 vista63144 117880536 61772
VISTA
chr9 117942648 117946798 enh73784 117880536 62112
Neural Stem Cells (H9)
chr9 117951985 117958330 enh57137 117880536 71449
Large Intestine Blood (GM12878) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Stomach
chr9 117958385 117984953 enh42224 117880536 77849
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Esophagus Astrocyte Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Stomach
chr9 117967486 117967725 vista63145 117880536 86950
VISTA
chr9 117969634 117969670 vista63146 117880536 89098
VISTA
chr9 117976093 117976379 vista63147 117880536 95557
VISTA
Transcript facotrs that regulate TNC[ENSG00000041982.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr9 117878211 117878873 POLR2A UCSC Txn Factor no Conserved 117880536 1663 108551665
chr9 117878249 117878484 CEBPB UCSC Txn Factor no Conserved 117880536 2052 108551666
chr9 117878284 117878299 STAT2 JASPAR yes 117880536 2237 95408224
chr9 117878286 117878296 NFATC3 JASPAR yes 117880536 2240 95408225
chr9 117878292 117878296 YY1 TRANSFAC yes 117880536 2240 95408226
chr9 117878295 117878487 FOS UCSC Txn Factor no Conserved 117880536 2049 108551667
chr9 117878297 117878302 MYB TRANSFAC yes 117880536 2234 95408227
chr9 117878324 117878334 NFIA JASPAR yes 117880536 2202 95408228
chr9 117878326 117878332 NFIC JASPAR yes 117880536 2204 95408229
chr9 117878338 117878348 NEUROG2 JASPAR yes 117880536 2188 95408230
chr9 117878344 117878357 ATF4 JASPAR yes 117880536 2179 95408231
chr9 117878344 117878358 SPIC JASPAR yes 117880536 2178 95408232
chr9 117878344 117878359 JUND JASPAR yes 117880536 2177 95408233
chr9 117878345 117878358 JUN JASPAR yes 117880536 2178 95408234
chr9 117878346 117878353 JUN TRANSFAC yes 117880536 2183 95408235
chr9 117878350 117878364 POU1F1 JASPAR yes 117880536 2172 95408236
chr9 117878352 117878356 YY1 TRANSFAC yes 117880536 2180 95408237
chr9 117878352 117878364 POU2F1 JASPAR yes 117880536 2172 95408238
chr9 117878357 117878370 ATF4 JASPAR yes 117880536 2166 95408239
chr9 117878375 117878384 JDP2 JASPAR yes 117880536 2152 95408240
chr9 117878395 117878407 SRF JASPAR yes 117880536 2129 95408241
chr9 117878397 117878401 YY1 TRANSFAC yes 117880536 2135 95408242
chr9 117878410 117878416 SOX10 JASPAR yes 117880536 2120 95408243
chr9 117883446 117883662 FOXA1 UCSC Txn Factor no Conserved 117880536 2910 108551668
chr9 117883583 117883589 TCF4 TRANSFAC yes 117880536 3047 95408244
SNPs associated with TNC[ENSG00000041982.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr9 117562995 rs4322082 G A 219811 Esophagus 0.115277 11251800
chr9 117209237 rs7025068 T C 573569 Esophagus 0.10803 11249203
chr9 118480821 rs76651938 C T 600285 Heart 0.192578 11257772
chr9 116892597 rs58340169 G A 890209 Breast 0.411679 11247493
chr9 117037095 rs776979351 T TTTA 745711 Thyroid 0.0566631 11248334
chr9 117888125 rs12378459 A G 7589 Liver 0.000348055 11253734
Details of TNC[ENSG00000041982.10]
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Genomic Location chr9:117782806-117880536[-]
TSS 117880536
Gene Name TNC
Ensembl ID ENSG00000041982.10
ENTREZID 3371
Uniprot
J3QSU6
Q4LE33
P24821
B4E1W8
Protein Name
TNC protein
Tenascin
Tenascin C
Tenascin-C additional domain 1
Expression levels of TNC[ENSG00000041982.10]
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