EnhancerDB
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Enhancers that regulate LAMC2[ENSG00000058085.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 183054245 183072455 enh12444 183155373 82918
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
chr1 183072685 183076835 enh27303 183155373 78538
Astrocyte
chr1 183105025 183109175 enh98585 183155373 46198
Uterus
chr1 183114918 183120855 enh12445 183155373 34518
Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Muscle (Myoblast) Heart
chr1 183125041 183136908 enh12446 183155373 18465
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
chr1 183129116 183129507 vista4153 183155373 25866
VISTA
chr1 183132366 183132749 vista4154 183155373 22624
VISTA
chr1 183133608 183133779 vista4155 183155373 21594
VISTA
chr1 183144905 183149995 enh50090 183155373 5378
Cervix (HeLa-S3) Large Intestine
chr1 183149947 183150219 vista4156 183155373 5154
VISTA
chr1 183158919 183172418 enh27304 183155373 3546
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
chr1 183161027 183161375 vista4157 183155373 5654
VISTA
chr1 183166871 183167293 vista4158 183155373 11498
VISTA
chr1 183171353 183171815 vista4159 183155373 15980
VISTA
chr1 183178797 183178927 vista4160 183155373 23424
VISTA
chr1 183191719 183192016 vista4161 183155373 36346
VISTA
chr1 183198825 183202975 enh98586 183155373 43452
Uterus
chr1 183205785 183211855 enh12447 183155373 50412
Placenta Large Intestine
chr1 183231145 183244789 enh12448 183155373 75772
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Breast Thymus Heart
chr1 183237084 183237447 vista4162 183155373 81711
VISTA
chr1 183239968 183240242 vista4163 183155373 84595
VISTA
chr1 183241451 183241867 vista4164 183155373 86078
VISTA
chr1 183245029 183258743 enh12449 183155373 89656
Cervix (HeLa-S3) Ovary Esophagus Bone (Osteoblast) Lung Stomach Placenta Breast Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Thymus Heart
chr1 183248987 183249454 vista4165 183155373 93614
VISTA
Transcript facotrs that regulate LAMC2[ENSG00000058085.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 183149173 183150383 TCF7L2 GTRD no Colon (HCT116) 183155373 4990 107850612
chr1 183149828 183150418 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 183155373 4955 107850623
chr1 183150032 183150412 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 183155373 4961 107850641
chr1 183158922 183158927 GATA2 JASPAR yes 183155373 3549 33662261
chr1 183158939 183158945 SOX10 JASPAR yes 183155373 3566 33662262
chr1 183158953 183158957 NFE TRANSFAC yes 183155373 3580 33662263
chr1 183158974 183158984 SREBF1 JASPAR yes 183155373 3601 33662264
chr1 183158974 183158984 SREBF2 JASPAR yes 183155373 3601 33662265
chr1 183158976 183158985 ZEB1 JASPAR yes 183155373 3603 33662266
chr1 183158990 183159000 MYF6 JASPAR yes 183155373 3617 33662267
chr1 183158992 183159001 SOX9 JASPAR yes 183155373 3619 33662268
chr1 183159041 183159049 HOXA5 JASPAR yes 183155373 3668 33662269
chr1 183159044 183159055 PHOX2A JASPAR yes 183155373 3671 33662270
chr1 183159044 183159055 PROP1 JASPAR yes 183155373 3671 33662271
chr1 183159049 183159060 NFKB1 JASPAR yes 183155373 3676 33662272
chr1 183159087 183159093 ZNF354C JASPAR yes 183155373 3714 33662273
chr1 183159089 183159094 GATA2 JASPAR yes 183155373 3716 33662274
chr1 183159095 183159103 EHF JASPAR yes 183155373 3722 33662275
chr1 183159101 183159116 STAT1 JASPAR yes 183155373 3728 33662276
chr1 183159101 183159121 TP53 JASPAR yes 183155373 3728 33662277
chr1 183159112 183159124 FOXC2 JASPAR yes 183155373 3739 33662278
chr1 183159112 183159126 FOXF2 JASPAR yes 183155373 3739 33662279
chr1 183159113 183159121 FOXG1 JASPAR yes 183155373 3740 33662280
chr1 183159137 183159152 MEF2C JASPAR yes 183155373 3764 33662281
chr1 183159138 183159152 POU1F1 JASPAR yes 183155373 3765 33662282
chr1 183159139 183159151 POU3F1 JASPAR yes 183155373 3766 33662283
chr1 183159139 183159151 POU3F2 JASPAR yes 183155373 3766 33662284
chr1 183159140 183159144 YY1 TRANSFAC yes 183155373 3767 33662285
chr1 183159140 183159149 POU5F1B JASPAR yes 183155373 3767 33662286
chr1 183159143 183159156 HNF1B JASPAR yes 183155373 3770 33662287
chr1 183159150 183159155 MYB TRANSFAC yes 183155373 3777 33662288
chr1 183159151 183159160 NKX2-8 JASPAR yes 183155373 3778 33662289
chr1 183159151 183159161 NKX2-3 JASPAR yes 183155373 3778 33662290
chr1 183159156 183161168 ZNF143 GTRD no Epithelial (MCF-7) 183155373 3783 107850642
chr1 183159160 183159173 ATF4 JASPAR yes 183155373 3787 33662291
chr1 183159213 183159233 TP63 JASPAR yes 183155373 3840 33662292
chr1 183159222 183159226 NFE TRANSFAC yes 183155373 3849 33662293
chr1 183159243 183159247 YY1 TRANSFAC yes 183155373 3870 33662294
chr1 183159246 183159261 MEF2C JASPAR yes 183155373 3873 33662295
chr1 183159249 183159253 YY1 TRANSFAC yes 183155373 3876 33662296
chr1 183159262 183159266 LFA1 TRANSFAC yes 183155373 3889 33662297
chr1 183159264 183161057 ZNF143 GTRD no Epithelial (MCF-7) 183155373 3891 107850643
chr1 183159272 183159281 ZEB1 JASPAR yes 183155373 3899 33662298
chr1 183159272 183159287 SCRT1 JASPAR yes 183155373 3899 33662299
chr1 183159273 183159283 FIGLA JASPAR yes 183155373 3900 33662300
chr1 183159275 183159280 USF2 TRANSFAC yes 183155373 3902 33662301
chr1 183159276 183159282 PTF TRANSFAC yes 183155373 3903 33662302
chr1 183159281 183159288 NKX3-1 JASPAR yes 183155373 3908 33662303
chr1 183159282 183159290 FOXC1 JASPAR yes 183155373 3909 33662304
chr1 183159312 183159326 ONECUT1 JASPAR yes 183155373 3939 33662305
chr1 183159312 183159326 ONECUT2 JASPAR yes 183155373 3939 33662306
chr1 183159312 183159326 ONECUT3 JASPAR yes 183155373 3939 33662307
chr1 183159315 183159325 CUX1 JASPAR yes 183155373 3942 33662308
chr1 183159315 183159325 CUX2 JASPAR yes 183155373 3942 33662309
chr1 183159328 183159332 YY1 TRANSFAC yes 183155373 3955 33662310
chr1 183159328 183159340 HLF JASPAR yes 183155373 3955 33662311
chr1 183159350 183159371 MAFG JASPAR yes 183155373 3977 33662312
chr1 183159355 183159373 MAFF JASPAR yes 183155373 3982 33662313
chr1 183159360 183159371 NRL JASPAR yes 183155373 3987 33662314
chr1 183159363 183159372 NKX3-2 JASPAR yes 183155373 3990 33662315
chr1 183159364 183159372 ISL2 JASPAR yes 183155373 3991 33662316
chr1 183159379 183159389 PAX3 JASPAR yes 183155373 4006 33662317
chr1 183159379 183159389 PAX7 JASPAR yes 183155373 4006 33662318
chr1 183159385 183159400 SOX21 JASPAR yes 183155373 4012 33662319
chr1 183159385 183159401 SOX4 JASPAR yes 183155373 4012 33662320
chr1 183159394 183159405 DMRT3 JASPAR yes 183155373 4021 33662321
chr1 183159405 183159408 MYB TRANSFAC yes 183155373 4032 33662322
chr1 183159413 183159422 THAP1 JASPAR yes 183155373 4040 33662323
chr1 183159449 183159458 NKX2-8 JASPAR yes 183155373 4076 33662324
chr1 183159449 183159459 NKX2-3 JASPAR yes 183155373 4076 33662325
chr1 183159450 183159458 ISL2 JASPAR yes 183155373 4077 33662326
chr1 183159450 183159459 NKX3-2 JASPAR yes 183155373 4077 33662327
chr1 183159458 183159461 MYB TRANSFAC yes 183155373 4085 33662328
chr1 183159461 183159465 YY1 TRANSFAC yes 183155373 4088 33662329
chr1 183159473 183159494 ZNF263 JASPAR yes 183155373 4100 33662330
chr1 183159557 183159578 IRF1 JASPAR yes 183155373 4184 33662331
chr1 183159561 183159575 SPI1 JASPAR yes 183155373 4188 33662332
chr1 183159568 183159580 IRF1 JASPAR yes 183155373 4195 33662333
chr1 183159581 183159595 IRF8 JASPAR yes 183155373 4208 33662334
chr1 183159581 183159596 IRF9 JASPAR yes 183155373 4208 33662335
chr1 183159586 183161101 ZNF143 GTRD no Epithelial (MCF-7) 183155373 4213 107850644
chr1 183159593 183159609 SOX8 JASPAR yes 183155373 4220 33662336
chr1 183159612 183159617 ETS2 TRANSFAC yes 183155373 4239 33662337
chr1 183159616 183159637 ZNF263 JASPAR yes 183155373 4243 33662338
chr1 183159616 183161052 ZNF274 GTRD no Cervix (HeLa-S3) 183155373 4243 21358768
chr1 183159616 183161052 ZNF274 GTRD no Cervix (HeLa-S3) 183155373 4243 107850645
chr1 183159633 183159639 ZNF354C JASPAR yes 183155373 4260 33662339
chr1 183159654 183159672 MAFF JASPAR yes 183155373 4281 33662340
chr1 183159655 183159670 MAFK JASPAR yes 183155373 4282 33662341
chr1 183159674 183159694 TP53 JASPAR yes 183155373 4301 33662342
chr1 183159680 183159700 TP53 JASPAR yes 183155373 4307 33662343
chr1 183159695 183159699 TEAD2 TRANSFAC yes 183155373 4322 33662344
chr1 183159709 183159715 SOX10 JASPAR yes 183155373 4336 33662345
chr1 183159724 183159728 YY1 TRANSFAC yes 183155373 4351 33662346
chr1 183159730 183159734 H1TF2 TRANSFAC yes 183155373 4357 33662347
chr1 183159730 183159734 NFE TRANSFAC yes 183155373 4357 33662348
chr1 183159730 183159734 SRF TRANSFAC yes 183155373 4357 33662349
chr1 183159735 183159740 ETS2 TRANSFAC yes 183155373 4362 33662350
chr1 183159754 183159760 TCF1 TRANSFAC yes 183155373 4381 33662351
chr1 183159788 183159798 BARHL2 JASPAR yes 183155373 4415 33662352
chr1 183159790 183159794 YY1 TRANSFAC yes 183155373 4417 33662353
chr1 183159791 183159802 CEBPB JASPAR yes 183155373 4418 33662354
chr1 183159798 183159811 ZBTB18 JASPAR yes 183155373 4425 33662355
chr1 183159827 183159835 FOXL1 JASPAR yes 183155373 4454 33662356
chr1 183159833 183159844 PROP1 JASPAR yes 183155373 4460 33662357
chr1 183159839 183159854 HNF1A JASPAR yes 183155373 4466 33662358
chr1 183159840 183159853 DUXA JASPAR yes 183155373 4467 33662359
chr1 183159840 183159853 HNF1B JASPAR yes 183155373 4467 33662360
chr1 183159841 183159852 DUX4 JASPAR yes 183155373 4468 33662361
chr1 183159841 183159852 PHOX2A JASPAR yes 183155373 4468 33662362
chr1 183159841 183159852 PROP1 JASPAR yes 183155373 4468 33662363
chr1 183159842 183159852 PAX3 JASPAR yes 183155373 4469 33662364
chr1 183159842 183159852 PAX7 JASPAR yes 183155373 4469 33662365
chr1 183159844 183159854 EMX1 JASPAR yes 183155373 4471 33662366
chr1 183159844 183159854 GSX2 JASPAR yes 183155373 4471 33662367
chr1 183159844 183159854 HOXB2 JASPAR yes 183155373 4471 33662368
chr1 183159844 183159854 MEOX2 JASPAR yes 183155373 4471 33662369
chr1 183159844 183159854 MNX1 JASPAR yes 183155373 4471 33662370
chr1 183159845 183159853 LMX1A JASPAR yes 183155373 4472 33662371
chr1 183159845 183159853 LMX1B JASPAR yes 183155373 4472 33662372
chr1 183159845 183159853 NKX6-1 JASPAR yes 183155373 4472 33662373
chr1 183159845 183159853 NKX6-2 JASPAR yes 183155373 4472 33662374
chr1 183159845 183159853 PDX1 JASPAR yes 183155373 4472 33662375
chr1 183159845 183159853 VAX1 JASPAR yes 183155373 4472 33662376
chr1 183159845 183159853 VAX2 JASPAR yes 183155373 4472 33662377
chr1 183159845 183159853 VSX1 JASPAR yes 183155373 4472 33662378
chr1 183159861 183159866 MYB TRANSFAC yes 183155373 4488 33662379
chr1 183159869 183159885 POU4F2 JASPAR yes 183155373 4496 33662380
chr1 183159869 183159885 POU4F3 JASPAR yes 183155373 4496 33662381
chr1 183159874 183159884 CUX2 JASPAR yes 183155373 4501 33662382
chr1 183159874 183159884 PAX3 JASPAR yes 183155373 4501 33662383
chr1 183159874 183159884 PAX7 JASPAR yes 183155373 4501 33662384
chr1 183159890 183159897 NKX3-1 JASPAR yes 183155373 4517 33662385
chr1 183159899 183159913 ONECUT2 JASPAR yes 183155373 4526 33662386
chr1 183159901 183159912 FOXH1 JASPAR yes 183155373 4528 33662387
chr1 183159919 183159923 YY1 TRANSFAC yes 183155373 4546 33662388
chr1 183159923 183159937 BATF3 JASPAR yes 183155373 4550 33662389
chr1 183159929 183159939 MEOX1 JASPAR yes 183155373 4556 33662390
chr1 183159929 183159939 MEOX2 JASPAR yes 183155373 4556 33662391
chr1 183159929 183159939 MNX1 JASPAR yes 183155373 4556 33662392
chr1 183159931 183159942 PROP1 JASPAR yes 183155373 4558 33662393
chr1 183159935 183159947 POU2F1 JASPAR yes 183155373 4562 33662394
chr1 183159935 183159948 POU3F3 JASPAR yes 183155373 4562 33662395
chr1 183159935 183159949 POU1F1 JASPAR yes 183155373 4562 33662396
chr1 183159936 183159948 POU3F1 JASPAR yes 183155373 4563 33662397
chr1 183159936 183159948 POU3F2 JASPAR yes 183155373 4563 33662398
chr1 183159937 183159946 POU3F4 JASPAR yes 183155373 4564 33662399
chr1 183159937 183159946 POU5F1B JASPAR yes 183155373 4564 33662400
chr1 183159985 183160003 NR3C1 JASPAR yes 183155373 4612 33662401
chr1 183160002 183160016 TCF7L2 JASPAR yes 183155373 4629 33662402
chr1 183160012 183160029 BCL6B JASPAR yes 183155373 4639 33662403
chr1 183160014 183160018 ESR1 TRANSFAC yes 183155373 4641 33662404
chr1 183160024 183160042 NR3C1 JASPAR yes 183155373 4651 33662405
chr1 183160032 183160036 YY1 TRANSFAC yes 183155373 4659 33662406
chr1 183160043 183160047 YY1 TRANSFAC yes 183155373 4670 33662407
chr1 183160051 183160057 GATA3 JASPAR yes 183155373 4678 33662408
chr1 183160063 183160068 GATA2 JASPAR yes 183155373 4690 33662409
chr1 183160081 183160089 NR4A2 JASPAR yes 183155373 4708 33662410
chr1 183160148 183160154 HiNF-A TRANSFAC yes 183155373 4775 33662411
chr1 183160158 183160162 YY1 TRANSFAC yes 183155373 4785 33662412
chr1 183160168 183160177 SRY JASPAR yes 183155373 4795 33662413
chr1 183160170 183160178 FOXO3 JASPAR yes 183155373 4797 33662414
chr1 183160176 183160186 TFAP4 JASPAR yes 183155373 4803 33662415
chr1 183160198 183160204 GATA1 TRANSFAC yes 183155373 4825 33662416
chr1 183160208 183160212 H1TF2 TRANSFAC yes 183155373 4835 33662417
chr1 183160208 183160212 NFE TRANSFAC yes 183155373 4835 33662418
chr1 183160208 183160212 SRF TRANSFAC yes 183155373 4835 33662419
chr1 183160215 183160227 PBX1 JASPAR yes 183155373 4842 33662420
chr1 183160219 183160229 RORA JASPAR yes 183155373 4846 33662421
chr1 183160221 183160229 CREB1 JASPAR yes 183155373 4848 33662422
chr1 183160223 183160238 ESR2 JASPAR yes 183155373 4850 33662423
chr1 183160224 183160228 ESR1 TRANSFAC yes 183155373 4851 33662424
chr1 183160227 183160231 YY1 TRANSFAC yes 183155373 4854 33662425
chr1 183160238 183160249 DMRT3 JASPAR yes 183155373 4865 33662426
chr1 183160241 183160246 GATA1 TRANSFAC yes 183155373 4868 33662427
chr1 183160247 183160253 MZF1 JASPAR yes 183155373 4874 33662428
chr1 183160258 183160262 YY1 TRANSFAC yes 183155373 4885 33662429
chr1 183160260 183160270 HOXD11 JASPAR yes 183155373 4887 33662430
chr1 183160263 183160274 CDX2 JASPAR yes 183155373 4890 33662431
chr1 183160291 183160295 TEAD2 TRANSFAC yes 183155373 4918 33662432
chr1 183160318 183160325 NKX3-1 JASPAR yes 183155373 4945 33662433
chr1 183160328 183160343 FOXP1 JASPAR yes 183155373 4955 33662434
chr1 183160342 183160357 MEF2A JASPAR yes 183155373 4969 33662435
chr1 183160343 183160348 GATA2 JASPAR yes 183155373 4970 33662436
chr1 183160350 183160360 NFATC3 JASPAR yes 183155373 4977 33662437
chr1 183160352 183160359 NFATC2 JASPAR yes 183155373 4979 33662438
chr1 183160355 183160370 STAT2 JASPAR yes 183155373 4982 33662439
chr1 183160356 183160368 IRF1 JASPAR yes 183155373 4983 33662440
SNPs associated with LAMC2[ENSG00000058085.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 183155305 rs2276543 G A 68 Esophagus 2.10331e-53 778755
chr1 183155305 rs2276543 G A 68 Esophagus 7.96294e-23 778755
chr1 183147534 rs397971895 G GT 7839 Esophagus 0.0824703 778697
chr1 183155305 rs2276543 G A 68 Heart 0.000107673 778755
chr1 183155305 rs2276543 G A 68 Heart 2.17761e-09 778755
chr1 183166573 rs519350 G A 0 Uterus 0.00806812 778878
chr1 182306672 rs2985438 G A 848701 Lung 0.055938 774326
chr1 183155399 rs2276542 A G 0 Stomach 0.025194 778756
chr1 183155305 rs2276543 G A 68 Adrenal 0.0194032 778755
Details of LAMC2[ENSG00000058085.10]
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Genomic Location chr1:183155373-183214035[+]
TSS 183155373
Gene Name LAMC2
Ensembl ID ENSG00000058085.10
ENTREZID 3918
Uniprot
Q13753
Protein Name
Laminin subunit gamma-2
Expression levels of LAMC2[ENSG00000058085.10]
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