EnhancerDB
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Enhancers that regulate RDH11[ENSG00000072042.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr14 68079705 68083855 enh99158 68162531 78676
Uterus
chr14 68084385 68092295 enh58586 68162531 70236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Uterus Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell)
chr14 68101125 68105435 enh51859 68162531 57096
Bone Marrow (K562) Large Intestine Muscle (A673) Thyroid Heart
chr14 68128392 68137535 enh3297 68162531 24996
Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-MC) Bone (Osteoblast) Blood (GM12878) Blood (Karpas-422) Lung (PC-9) Spleen Thymus
chr14 68161499 68161767 vista18172 68162531 764
VISTA
chr14 68169305 68174255 enh109645 68162531 6774
Stomach
chr14 68174285 68178870 enh15701 68162531 11754
Placenta Cervix (HeLa-S3)
chr14 68180025 68184475 enh15702 68162531 17494
Placenta
chr14 68200185 68208215 enh15703 68162531 37654
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Stomach Placenta Pancreas Epithelial (MCF-7)
chr14 68208817 68213087 enh64792 68162531 46286
Heart
chr14 68228225 68232915 enh15704 68162531 65694
Prostate (PC-3) Placenta
Transcript facotrs that regulate RDH11[ENSG00000072042.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr14 68161305 68162720 POLR2A UCSC Txn Factor no Conserved 68162531 189 108108163
chr14 68161364 68161744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68162531 787 108108164
chr14 68161373 68161697 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68162531 834 108108165
chr14 68161373 68161764 NFYA UCSC Txn Factor no Conserved 68162531 767 108108166
chr14 68161379 68161739 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68162531 792 108108167
chr14 68161406 68161926 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68162531 605 108108168
chr14 68161407 68161767 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68162531 764 108108169
chr14 68161417 68161793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68162531 738 108108170
chr14 68161424 68161660 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68162531 871 108108171
chr14 68161434 68161774 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 757 108108172
chr14 68161437 68161807 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68162531 724 108108173
chr14 68161438 68161774 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 757 108108174
chr14 68161438 68161808 SREBP1 UCSC Txn Factor no Conserved 68162531 723 108108175
chr14 68161438 68161808 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 723 108108176
chr14 68161441 68161697 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68162531 834 108108177
chr14 68161442 68161772 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68162531 759 108108178
chr14 68161443 68162019 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68162531 512 108108179
chr14 68161444 68161764 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68162531 767 108108180
chr14 68161454 68161952 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68162531 579 108108181
chr14 68161460 68161784 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68162531 747 108108182
chr14 68161465 68161661 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68162531 870 108108183
chr14 68161466 68161756 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 775 108108184
chr14 68161468 68161746 NFYB UCSC Txn Factor no Conserved 68162531 785 108108185
chr14 68161468 68161746 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68162531 785 108108186
chr14 68161469 68161789 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68162531 742 108108187
chr14 68161471 68161720 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68162531 811 108108188
chr14 68161474 68161978 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68162531 553 108108189
chr14 68161489 68161749 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 782 108108190
chr14 68161491 68161781 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68162531 750 108108191
chr14 68161491 68161867 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68162531 664 108108192
chr14 68161493 68161709 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68162531 822 108108193
chr14 68161494 68161994 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68162531 537 108108194
chr14 68161501 68161507 HiNF-A TRANSFAC yes 68162531 1024 107567848
chr14 68161503 68161993 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68162531 538 108108195
chr14 68161508 68161884 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 68162531 647 108108196
chr14 68161509 68161779 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68162531 752 108108197
chr14 68161511 68161831 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68162531 700 108108198
chr14 68161519 68161895 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68162531 636 108108199
chr14 68161519 68161903 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 68162531 628 108108200
chr14 68161523 68161843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68162531 688 108108201
chr14 68161525 68162049 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 68162531 482 108108202
chr14 68161531 68161935 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68162531 596 108108203
chr14 68161539 68161899 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 632 108108204
chr14 68161540 68161820 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 68162531 711 108108205
chr14 68161549 68161554 SP1 TRANSFAC yes 68162531 977 107567849
chr14 68161550 68161930 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 601 108108206
chr14 68161551 68161560 ZEB1 JASPAR yes 68162531 971 107567850
chr14 68161552 68161562 TCF4 JASPAR yes 68162531 969 107567851
chr14 68161554 68161559 USF2 TRANSFAC yes 68162531 972 107567852
chr14 68161558 68161563 TFAP2A TRANSFAC yes 68162531 968 107567853
chr14 68161558 68161564 MZF1 JASPAR yes 68162531 967 107567854
chr14 68161558 68162018 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 513 108108207
chr14 68161559 68161569 SP1 JASPAR yes 68162531 962 107567855
chr14 68161560 68161565 ETS2 TRANSFAC yes 68162531 966 107567856
chr14 68161560 68161960 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 571 108108208
chr14 68161565 68161921 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68162531 610 108108209
chr14 68161572 68161792 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68162531 739 108108210
chr14 68161574 68161578 NFE TRANSFAC yes 68162531 953 107567857
chr14 68161579 68162249 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68162531 282 108108211
chr14 68161581 68161792 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68162531 739 108108212
chr14 68161584 68161940 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68162531 591 108108213
chr14 68161585 68161895 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 68162531 636 108108214
chr14 68161585 68161919 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68162531 612 108108215
chr14 68161586 68162202 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68162531 329 108108216
chr14 68161591 68161595 H4TF2 TRANSFAC yes 68162531 936 107567858
chr14 68161592 68161962 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68162531 569 108108217
chr14 68161611 68161618 NKX3-1 JASPAR yes 68162531 913 107567859
chr14 68161611 68161952 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 579 108108218
chr14 68161614 68161629 NFYB JASPAR yes 68162531 902 107567860
chr14 68161614 68161852 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68162531 679 108108219
chr14 68161616 68161632 NFYA JASPAR yes 68162531 899 107567861
chr14 68161617 68161635 NFYA JASPAR yes 68162531 896 107567862
chr14 68161617 68161857 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68162531 674 108108220
chr14 68161621 68161625 H1TF2 TRANSFAC yes 68162531 906 107567863
chr14 68161621 68161625 NFE TRANSFAC yes 68162531 906 107567864
chr14 68161621 68161625 SRF TRANSFAC yes 68162531 906 107567865
chr14 68161630 68161825 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 706 108108221
chr14 68161641 68161917 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 614 108108222
chr14 68161643 68161657 ZIC1 JASPAR yes 68162531 874 107567866
chr14 68161646 68161764 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 767 108108223
chr14 68161654 68161665 FOS JASPAR yes 68162531 866 107567867
chr14 68161654 68161665 FOSL1 JASPAR yes 68162531 866 107567868
chr14 68161661 68161842 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 68162531 689 108108224
chr14 68161666 68161670 LFA1 TRANSFAC yes 68162531 861 107567869
chr14 68161666 68161680 TLX1 JASPAR yes 68162531 851 107567870
chr14 68161676 68161842 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68162531 689 108108225
chr14 68161678 68161689 TFAP2A JASPAR yes 68162531 842 107567871
chr14 68161678 68161689 TFAP2B JASPAR yes 68162531 842 107567872
chr14 68161678 68161689 TFAP2C JASPAR yes 68162531 842 107567873
chr14 68161686 68161698 PBX1 JASPAR yes 68162531 833 107567874
chr14 68161696 68161700 NFE TRANSFAC yes 68162531 831 107567875
chr14 68161698 68161708 FIGLA JASPAR yes 68162531 823 107567876
chr14 68161700 68161705 USF2 TRANSFAC yes 68162531 826 107567877
chr14 68161705 68161709 ESR1 TRANSFAC yes 68162531 822 107567878
chr14 68161713 68161724 E2F6 JASPAR yes 68162531 807 107567879
chr14 68161715 68161731 ZNF143 JASPAR yes 68162531 800 107567880
chr14 68161736 68161746 SP1 JASPAR yes 68162531 785 107567881
chr14 68161739 68161744 SP1 TRANSFAC yes 68162531 787 107567882
chr14 68161739 68161745 SP1 TRANSFAC yes 68162531 786 107567883
chr14 68161751 68161995 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68162531 536 108108226
chr14 68161760 68161763 MYB TRANSFAC yes 68162531 768 107567884
chr14 68161762 68162066 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68162531 465 108108227
SNPs associated with RDH11[ENSG00000072042.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr14 68090746 rs148248893 C T 52772 Heart 0.198442 3620075
chr14 68818349 rs17105459 C T 655818 Pancreas 0.200428 3624340
chr14 69062114 rs963918 C T 899583 Spleen 0.330049 3626857
chr14 68881610 rs111554012 G A 719079 Uterus 0.24248 3625012
chr14 68727506 rs1957569 A G 564975 Liver 0.24006 3623442
chr14 67956678 rs59566617 G A 186840 Stomach 0.345834 3619400
chr14 69041073 rs113583947 A G 878542 Adrenal 0.165028 3626600
Details of RDH11[ENSG00000072042.8]
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Genomic Location chr14:68143518-68162531[-]
TSS 68162531
Gene Name RDH11
Ensembl ID ENSG00000072042.8
ENTREZID 51109
Uniprot
A0A0S2Z583
Q8TC12
Protein Name
Retinol dehydrogenase 11
Retinol dehydrogenase 11 isoform 1
Retinol dehydrogenase 11 isoform 2
Expression levels of RDH11[ENSG00000072042.8]
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