EnhancerDB
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Enhancers that regulate IGSF9[ENSG00000085552.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 159813605 159822144 enh12314 159915386 93242
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Muscle (Myoblast) Muscle (Myotube)
chr1 159819832 159820037 vista3556 159915386 95349
VISTA
chr1 159829428 159829783 vista3557 159915386 85603
VISTA
chr1 159837145 159841695 enh79222 159915386 73691
Prostate (PC-3)
chr1 159851477 159851987 vista3558 159915386 63399
VISTA
chr1 159852272 159852569 vista3559 159915386 62817
VISTA
chr1 159857105 159861975 enh79223 159915386 53411
Prostate (PC-3)
chr1 159859603 159860031 vista3560 159915386 55355
VISTA
chr1 159863185 159867335 enh109355 159915386 48051
Stomach
chr1 159874885 159879035 enh12315 159915386 36351
Placenta
chr1 159878004 159878104 vista3561 159915386 37282
VISTA
chr1 159880076 159880706 vista3562 159915386 34680
VISTA
chr1 159880445 159887670 enh61913 159915386 27716
Esophagus Prostate (PC-3)
chr1 159886226 159886307 vista3563 159915386 29079
VISTA
chr1 159887185 159887340 vista3564 159915386 28046
VISTA
chr1 159892447 159892988 vista3565 159915386 22398
VISTA
chr1 159907968 159908165 vista3566 159915386 7221
VISTA
chr1 159910997 159911192 vista3567 159915386 4194
VISTA
chr1 159914077 159914586 vista3568 159915386 800
VISTA
chr1 159938805 159943055 enh49996 159915386 23419
Pancreas Liver (HepG2) Large Intestine
chr1 159957545 159966935 enh27154 159915386 42159
Esophagus Astrocyte Prostate (PC-3) Epithelial (MCF-7)
chr1 159961374 159961617 vista3569 159915386 45988
VISTA
chr1 159971886 159983815 enh49997 159915386 56500
Prostate (RWPE1) Colon (HCT116) Large Intestine
chr1 159986730 159991068 enh89517 159915386 71344
Prostate (RWPE1)
chr1 160013545 160019555 enh92114 159915386 98159
Liver (HepG2)
Transcript facotrs that regulate IGSF9[ENSG00000085552.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 159909035 159911947 ZNF274 GTRD no Bone Marrow (K562) 159915386 3439 107839150
chr1 159909100 159911693 ZNF274 GTRD no Bone Marrow (K562) 159915386 3693 107839151
chr1 159909482 159911513 ZNF274 GTRD no Cervix (HeLa-S3) 159915386 3873 107839152
chr1 159909636 159911447 ZNF274 GTRD no Bone Marrow (K562) 159915386 3939 107839153
chr1 159909775 159912120 ZNF274 GTRD no Blood (GM12878) 159915386 3266 107839154
chr1 159909837 159912893 ZNF274 GTRD no Blood (GM12878) 159915386 2493 107839155
chr1 159909907 159912222 ZNF274 GTRD no Blood (GM12878) 159915386 3164 107839156
chr1 159909917 159912152 ZNF274 GTRD no Blood (GM12878) 159915386 3234 107839157
chr1 159909922 159911290 ZNF274 GTRD no Blood (GM12878) 159915386 4096 107839158
chr1 159909950 159911750 ZBTB33 GTRD no Lung (A549) 159915386 3636 107839159
chr1 159909959 159911583 ZNF274 GTRD no Blood (GM12878) 159915386 3803 107839160
chr1 159909986 159911308 ZNF274 GTRD no Blood (GM12878) 159915386 4078 107839161
chr1 159910009 159911145 ZBTB33 GTRD no Lung (A549) 159915386 4241 107839162
chr1 159910027 159911053 ZNF274 GTRD no Blood (GM12878) 159915386 4333 107839163
chr1 159910065 159911022 P63 GTRD no Skin (Keratinocyte) 159915386 4364 107839164
chr1 159910078 159911486 ZNF274 GTRD no Bone Marrow (K562) 159915386 3900 107839165
chr1 159910092 159911327 ZNF274 GTRD no Cervix (HeLa-S3) 159915386 4059 107839166
chr1 159910107 159911735 ZNF274 GTRD no Blood (GM12878) 159915386 3651 107839167
chr1 159910111 159911513 ZNF274 GTRD no Blood (GM12878) 159915386 3873 107839168
chr1 159910130 159911022 P63 GTRD no Skin (Keratinocyte) 159915386 4364 107839169
chr1 159910134 159911027 ZNF274 GTRD no Bone Marrow (K562) 159915386 4359 107839170
chr1 159910136 159911216 ZNF274 GTRD no Cervix (HeLa-S3) 159915386 4170 107839171
chr1 159910138 159911344 ZNF274 GTRD no Blood (GM12878) 159915386 4042 107839172
chr1 159910148 159911036 ZBTB33 GTRD no Lung (A549) 159915386 4350 107839173
chr1 159910161 159911939 ZNF274 GTRD no Blood (GM12878) 159915386 3447 107839174
chr1 159910165 159911115 ZNF274 GTRD no Bone Marrow (K562) 159915386 4271 107839175
chr1 159910172 159911069 ZBTB33 GTRD no Lung (A549) 159915386 4317 107839176
chr1 159910173 159911262 ZNF274 GTRD no Blood (GM12878) 159915386 4124 107839177
chr1 159910182 159911044 ZNF274 GTRD no Blood (GM12878) 159915386 4342 107839178
chr1 159910211 159911361 ZNF274 GTRD no Blood (GM12878) 159915386 4025 107839179
chr1 159910215 159911134 ZNF274 GTRD no Bone Marrow (K562) 159915386 4252 107839180
chr1 159910222 159911072 ZNF274 GTRD no Blood (GM12878) 159915386 4314 107839181
chr1 159910228 159911268 SOX2 GTRD no Neural Stem Cells (H9) 159915386 4118 107839182
chr1 159910230 159911045 ZNF274 GTRD no Cervix (HeLa-S3) 159915386 4341 107839183
chr1 159910272 159911070 ZNF274 GTRD no Blood (GM12878) 159915386 4316 107839184
chr1 159910281 159911129 ZNF274 GTRD no Blood (GM12878) 159915386 4257 107839185
chr1 159910281 159911257 ZNF274 GTRD no Bone Marrow (K562) 159915386 4129 107839186
chr1 159910359 159911297 ZNF274 GTRD no Bone Marrow (K562) 159915386 4089 107839187
chr1 159910391 159911233 ZBTB33 GTRD no Lung (A549) 159915386 4153 107839188
chr1 159910843 159912333 AR GTRD no Prostate (PC-3) 159915386 3053 107839189
chr1 159910856 159911376 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 159915386 4010 107839190
chr1 159910859 159911237 SOX2 GTRD no Neural Stem Cells (H9) 159915386 4149 107839191
chr1 159910901 159911076 SOX2 GTRD no Neural Stem Cells (H9) 159915386 4310 107839192
chr1 159911028 159911037 THAP1 JASPAR yes 159915386 4349 118382909
chr1 159911029 159911042 TFAP2A JASPAR yes 159915386 4344 118382910
chr1 159911029 159911042 TFAP2B JASPAR yes 159915386 4344 118382911
chr1 159911029 159911042 TFAP2C JASPAR yes 159915386 4344 118382912
chr1 159911029 159911044 TFAP2A JASPAR yes 159915386 4342 118382913
chr1 159911029 159911044 TFAP2C JASPAR yes 159915386 4342 118382914
chr1 159911055 159911073 RARA JASPAR yes 159915386 4313 118382915
chr1 159911059 159911074 RFX5 JASPAR yes 159915386 4312 118382916
chr1 159911074 159911088 SPIC JASPAR yes 159915386 4298 118382917
chr1 159911074 159911088 ZIC1 JASPAR yes 159915386 4298 118382918
chr1 159911074 159911089 ZIC3 JASPAR yes 159915386 4297 118382919
chr1 159911074 159911089 ZIC4 JASPAR yes 159915386 4297 118382920
chr1 159911076 159911089 SCRT2 JASPAR yes 159915386 4297 118382921
chr1 159911083 159911098 RFX5 JASPAR yes 159915386 4288 118382922
chr1 159911115 159911121 SOX10 JASPAR yes 159915386 4265 118382923
chr1 159911127 159911139 INSM1 JASPAR yes 159915386 4247 118382924
chr1 159911130 159911140 SP1 JASPAR yes 159915386 4246 118382925
chr1 159911160 159911168 BSX JASPAR yes 159915386 4218 118382926
chr1 159911172 159911177 SP1 TRANSFAC yes 159915386 4209 118382927
chr1 159911185 159911189 H4TF2 TRANSFAC yes 159915386 4197 118382928
chr1 159912627 159916946 AR GTRD no Prostate (PC-3) 159915386 1560 107839193
chr1 159913154 159915055 ZBTB33 GTRD no Lung (A549) 159915386 331 107839194
chr1 159913390 159917199 ZBTB33 GTRD no Lung (A549) 159915386 1813 107839195
chr1 159913475 159914333 ZNF274 GTRD no Blood (GM12878) 159915386 1053 107839196
chr1 159913482 159915064 ZNF143 GTRD no Epithelial (MCF-7) 159915386 322 107839197
chr1 159913490 159915142 ZBTB33 GTRD no Lung (A549) 159915386 244 107839198
chr1 159913514 159914906 ZBTB33 GTRD no Lung (A549) 159915386 480 107839199
chr1 159913554 159914940 ZBTB33 GTRD no Lung (A549) 159915386 446 107839200
chr1 159913567 159914903 ZBTB33 GTRD no Lung (A549) 159915386 483 107839201
chr1 159913576 159915031 ZNF143 GTRD no Epithelial (MCF-7) 159915386 355 107839202
chr1 159913617 159914488 ZNF274 GTRD no Bone Marrow (K562) 159915386 898 107839203
chr1 159913636 159914585 ZNF274 GTRD no Blood (GM12878) 159915386 801 107839204
chr1 159913671 159914972 ZNF143 GTRD no Epithelial (MCF-7) 159915386 414 107839205
chr1 159913695 159914702 ZNF143 GTRD no Epithelial (MCF-7) 159915386 684 107839206
chr1 159913724 159914964 ZBTB33 GTRD no Lung (A549) 159915386 422 107839207
chr1 159913736 159914916 ZNF143 GTRD no Epithelial (MCF-7) 159915386 470 107839208
chr1 159913773 159914804 ZBTB33 GTRD no Lung (A549) 159915386 582 107839209
chr1 159913787 159915014 ZBTB33 GTRD no Lung (A549) 159915386 372 107839210
chr1 159913826 159914897 ZBTB33 GTRD no Lung (A549) 159915386 489 107839211
chr1 159913844 159915142 ZBTB33 GTRD no Lung (A549) 159915386 244 107839212
chr1 159913852 159914763 ZBTB33 GTRD no Lung (A549) 159915386 623 107839213
chr1 159913860 159914932 ZBTB33 GTRD no Lung (A549) 159915386 454 107839214
chr1 159913910 159914868 ZBTB33 GTRD no Lung (A549) 159915386 518 107839215
chr1 159914015 159914711 ZNF143 GTRD no Epithelial (MCF-7) 159915386 675 107839216
chr1 159914041 159914899 ZBTB33 GTRD no Lung (A549) 159915386 487 107839217
chr1 159914090 159914096 NFIC JASPAR yes 159915386 1290 118382929
chr1 159914095 159914109 JUN JASPAR yes 159915386 1277 118382930
chr1 159914098 159914109 FOSL2 JASPAR yes 159915386 1277 118382931
chr1 159914098 159914109 JUNB JASPAR yes 159915386 1277 118382932
chr1 159914099 159914110 FOS JASPAR yes 159915386 1276 118382933
chr1 159914099 159914110 FOSL1 JASPAR yes 159915386 1276 118382934
chr1 159914099 159914110 JUND JASPAR yes 159915386 1276 118382935
chr1 159914100 159914114 JUN JASPAR yes 159915386 1272 118382936
chr1 159914101 159914108 JUN TRANSFAC yes 159915386 1278 118382937
chr1 159914127 159914742 ZNF143 GTRD no Epithelial (MCF-7) 159915386 644 107839218
chr1 159914131 159914141 ZNF740 JASPAR yes 159915386 1245 118382938
chr1 159914131 159914812 ZNF143 GTRD no Epithelial (MCF-7) 159915386 574 107839219
chr1 159914135 159914144 ZEB1 JASPAR yes 159915386 1242 118382939
chr1 159914136 159914146 TCF4 JASPAR yes 159915386 1240 118382940
chr1 159914137 159914146 SNAI2 JASPAR yes 159915386 1240 118382941
chr1 159914138 159914143 USF2 TRANSFAC yes 159915386 1243 118382942
chr1 159914141 159914150 THAP1 JASPAR yes 159915386 1236 118382943
chr1 159914147 159914157 MZF1 JASPAR yes 159915386 1229 118382944
chr1 159914155 159914860 ZNF143 GTRD no Epithelial (MCF-7) 159915386 526 107839220
chr1 159914155 159914924 ZBTB33 GTRD no Lung (A549) 159915386 462 107839221
chr1 159914166 159914911 ZNF143 GTRD no Epithelial (MCF-7) 159915386 475 107839222
chr1 159914167 159914755 ZNF143 GTRD no Epithelial (MCF-7) 159915386 631 107839223
chr1 159914170 159914190 TP63 JASPAR yes 159915386 1196 118382945
chr1 159914171 159914189 TP73 JASPAR yes 159915386 1197 118382946
chr1 159914172 159914192 TP53 JASPAR yes 159915386 1194 118382947
chr1 159914172 159914698 ZNF143 GTRD no Epithelial (MCF-7) 159915386 688 107839224
chr1 159914173 159914188 TP53 JASPAR yes 159915386 1198 118382948
chr1 159914185 159914189 H4TF2 TRANSFAC yes 159915386 1197 118382949
chr1 159914193 159914741 ZNF143 GTRD no Epithelial (MCF-7) 159915386 645 107839225
chr1 159914196 159914208 PKNOX2 JASPAR yes 159915386 1178 118382950
chr1 159914208 159914219 FLI1 JASPAR yes 159915386 1167 118382951
chr1 159914209 159914219 ETV6 JASPAR yes 159915386 1167 118382952
chr1 159914210 159914217 SPI1 JASPAR yes 159915386 1169 118382953
chr1 159914210 159914218 EHF JASPAR yes 159915386 1168 118382954
chr1 159914213 159914228 ZBTB33 JASPAR yes 159915386 1158 118382955
chr1 159914218 159914906 ZNF143 GTRD no Epithelial (MCF-7) 159915386 480 107839226
chr1 159914225 159914231 NFIC JASPAR yes 159915386 1155 118382956
chr1 159914234 159914244 SP1 JASPAR yes 159915386 1142 118382957
chr1 159914237 159914249 INSM1 JASPAR yes 159915386 1137 118382958
chr1 159914246 159914266 RREB1 JASPAR yes 159915386 1120 118382959
chr1 159914252 159914264 ZBTB7C JASPAR yes 159915386 1122 118382960
chr1 159914265 159914851 ZBTB33 GTRD no Lung (A549) 159915386 535 107839227
chr1 159914271 159914291 RREB1 JASPAR yes 159915386 1095 118382961
chr1 159914277 159914298 ZNF263 JASPAR yes 159915386 1088 118382962
chr1 159914281 159914301 RREB1 JASPAR yes 159915386 1085 118382963
chr1 159914290 159914720 ZNF143 GTRD no Epithelial (MCF-7) 159915386 666 107839228
chr1 159914293 159914299 SP1 TRANSFAC yes 159915386 1087 118382964
chr1 159914298 159914302 H1TF2 TRANSFAC yes 159915386 1084 118382965
chr1 159914298 159914302 NFE TRANSFAC yes 159915386 1084 118382966
chr1 159914298 159914302 SRF TRANSFAC yes 159915386 1084 118382967
chr1 159914299 159914852 ZNF143 GTRD no Epithelial (MCF-7) 159915386 534 107839229
chr1 159914322 159914668 ZNF143 GTRD no Epithelial (MCF-7) 159915386 718 107839230
chr1 159914325 159914862 ZBTB33 GTRD no Lung (A549) 159915386 524 107839231
chr1 159914338 159914344 MZF1 JASPAR yes 159915386 1042 118382968
chr1 159914346 159914848 ZBTB33 GTRD no Lung (A549) 159915386 538 107839232
chr1 159914350 159914360 SP1 JASPAR yes 159915386 1026 118382969
chr1 159914353 159914733 ZNF143 GTRD no Epithelial (MCF-7) 159915386 653 107839233
chr1 159914357 159914361 H4TF2 TRANSFAC yes 159915386 1025 118382970
chr1 159914359 159914776 ZNF143 GTRD no Epithelial (MCF-7) 159915386 610 107839234
chr1 159914373 159914816 ZNF274 GTRD no Liver (HepG2) 159915386 570 107839235
chr1 159914398 159914401 MYB TRANSFAC yes 159915386 985 118382971
chr1 159914399 159914411 TFAP2A JASPAR yes 159915386 975 118382972
chr1 159914399 159914411 TFAP2B JASPAR yes 159915386 975 118382973
chr1 159914399 159914411 TFAP2C JASPAR yes 159915386 975 118382974
chr1 159914399 159914414 TFAP2A JASPAR yes 159915386 972 118382975
chr1 159914399 159914414 TFAP2C JASPAR yes 159915386 972 118382976
chr1 159914400 159914411 TFAP2A JASPAR yes 159915386 975 118382977
chr1 159914401 159914410 TFAP2A JASPAR yes 159915386 976 118382978
chr1 159914404 159914420 ZNF143 JASPAR yes 159915386 966 118382979
chr1 159914406 159914410 LFA1 TRANSFAC yes 159915386 976 118382980
chr1 159914448 159914452 LFA1 TRANSFAC yes 159915386 934 118382981
chr1 159914470 159914474 H4TF2 TRANSFAC yes 159915386 912 118382982
chr1 159914471 159914491 TP63 JASPAR yes 159915386 895 118382983
chr1 159914490 159914500 NFIA JASPAR yes 159915386 886 118382984
chr1 159914492 159914498 NFIC JASPAR yes 159915386 888 118382985
chr1 159914498 159914513 HNF4A JASPAR yes 159915386 873 118382986
chr1 159914499 159914513 NR2F1 JASPAR yes 159915386 873 118382987
chr1 159914499 159914514 HNF4G JASPAR yes 159915386 872 118382988
chr1 159914531 159914546 HNF4G JASPAR yes 159915386 840 118382989
chr1 159914532 159914546 NR2F1 JASPAR yes 159915386 840 118382990
chr1 159914532 159914547 HNF4A JASPAR yes 159915386 839 118382991
chr1 159914550 159914561 CDX2 JASPAR yes 159915386 825 118382992
chr1 159914554 159914558 TEAD2 TRANSFAC yes 159915386 828 118382993
chr1 159914554 159914559 TBP TRANSFAC yes 159915386 827 118382994
chr1 159914554 159914560 TFIID TRANSFAC yes 159915386 826 118382995
chr1 159914554 159915073 ZNF274 GTRD no Blood (GM12878) 159915386 313 107839236
SNPs associated with IGSF9[ENSG00000085552.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 160029857 rs75621131 G T 114471 Esophagus 0.208646 663665
chr1 160671700 rs569567 A G 756314 Heart 0.305496 667385
chr1 160625549 rs201623645 CCTAA C 710163 Spleen 0.0635228 666972
chr1 160591253 rs71628183 A G 675867 Ovary 0.354724 666516
chr1 159787423 rs145147679 G A 109406 Thyroid 0.127758 662002
chr1 159723800 rs114530473 C T 173029 Liver 0.326271 661821
chr1 159478983 rs115739460 C T 417846 Lung 0.118475 661408
Details of IGSF9[ENSG00000085552.12]
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Genomic Location chr1:159896829-159915386[-]
TSS 159915386
Gene Name IGSF9
Ensembl ID ENSG00000085552.12
ENTREZID 57549
Uniprot
Q9P2J2
Protein Name
Protein turtle homolog A
Expression levels of IGSF9[ENSG00000085552.12]
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