EnhancerDB
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Enhancers that regulate CHMP5[ENSG00000086065.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr9 33148972 33165175 enh25532 33264940 99765
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr9 33164497 33164994 vista61804 33264940 99946
VISTA
chr9 33165457 33166051 vista61805 33264940 98889
VISTA
chr9 33171235 33171390 vista61806 33264940 93550
VISTA
chr9 33172218 33172440 vista61807 33264940 92500
VISTA
chr9 33178585 33196190 enh25533 33264940 68750
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Heart
chr9 33196285 33212575 enh25534 33264940 52365
Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Spleen Uterus Thymus Stomach
chr9 33202575 33202797 vista61808 33264940 62143
VISTA
chr9 33220097 33237177 enh25535 33264940 27763
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Lung (PC-9) Pancreas Muscle (Myotube) Epithelial (MCF-7)
chr9 33229414 33229715 vista61809 33264940 35225
VISTA
chr9 33229811 33230012 vista61810 33264940 34928
VISTA
chr9 33231410 33231538 vista61811 33264940 33402
VISTA
chr9 33233885 33234477 vista61812 33264940 30463
VISTA
chr9 33268680 33268843 vista61813 33264940 3740
VISTA
chr9 33271725 33276235 enh41865 33264940 6785
Astrocyte Prostate (PC-3)
chr9 33291905 33299872 enh49481 33264940 26965
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Blood (GM12878) Peripheral Blood (MM.1S) Thymus Stomach
chr9 33320845 33324995 enh111287 33264940 55905
Cervix (HeLa-S3)
chr9 33327305 33331455 enh109202 33264940 62365
Lung (PC-9)
chr9 33329062 33329543 vista61814 33264940 64122
VISTA
chr9 33350411 33350624 vista61815 33264940 85471
VISTA
Transcript facotrs that regulate CHMP5[ENSG00000086065.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr9 33268692 33268699 NKX3-1 JASPAR yes 33264940 3752 95345823
chr9 33268696 33268699 MYB TRANSFAC yes 33264940 3756 95345824
chr9 33268696 33268714 SRF JASPAR yes 33264940 3756 95345825
chr9 33268703 33268709 TCF4 TRANSFAC yes 33264940 3763 95345826
chr9 33268706 33268717 HOXA10 JASPAR yes 33264940 3766 95345827
chr9 33268707 33268717 HOXD11 JASPAR yes 33264940 3767 95345828
chr9 33268707 33268717 HOXD13 JASPAR yes 33264940 3767 95345829
chr9 33268709 33268713 TEAD2 TRANSFAC yes 33264940 3769 95345830
chr9 33268709 33268714 TBP TRANSFAC yes 33264940 3769 95345831
chr9 33268709 33268715 TFIID TRANSFAC yes 33264940 3769 95345832
chr9 33268739 33268749 NFATC3 JASPAR yes 33264940 3799 95345833
chr9 33268741 33268748 NFATC2 JASPAR yes 33264940 3801 95345834
chr9 33268746 33268754 FOXL1 JASPAR yes 33264940 3806 95345835
chr9 33268748 33268759 FOXB1 JASPAR yes 33264940 3808 95345836
chr9 33268748 33268759 FOXC1 JASPAR yes 33264940 3808 95345837
chr9 33268749 33268761 FOXI1 JASPAR yes 33264940 3809 95345838
chr9 33268762 33268777 FOXP1 JASPAR yes 33264940 3822 95345839
chr9 33268762 33268783 IRF1 JASPAR yes 33264940 3822 95345840
chr9 33268765 33268779 IRF7 JASPAR yes 33264940 3825 95345841
chr9 33268766 33268781 STAT2 JASPAR yes 33264940 3826 95345842
chr9 33268777 33268791 RORA JASPAR yes 33264940 3837 95345843
chr9 33268793 33268808 MEF2C JASPAR yes 33264940 3853 95345844
chr9 33268794 33268809 MEF2A JASPAR yes 33264940 3854 95345845
chr9 33268795 33268807 MEF2A JASPAR yes 33264940 3855 95345846
chr9 33268795 33268807 MEF2D JASPAR yes 33264940 3855 95345847
chr9 33268803 33268806 MYB TRANSFAC yes 33264940 3863 95345848
chr9 33268814 33268826 POU2F1 JASPAR yes 33264940 3874 95345849
chr9 33268814 33268827 POU3F3 JASPAR yes 33264940 3874 95345850
chr9 33268814 33268828 POU1F1 JASPAR yes 33264940 3874 95345851
chr9 33268815 33268827 POU3F1 JASPAR yes 33264940 3875 95345852
chr9 33268815 33268827 POU3F2 JASPAR yes 33264940 3875 95345853
chr9 33268816 33268825 POU3F4 JASPAR yes 33264940 3876 95345854
chr9 33268816 33268825 POU5F1B JASPAR yes 33264940 3876 95345855
chr9 33268822 33268843 IRF1 JASPAR yes 33264940 3882 95345856
chr9 33268824 33268839 STAT2 JASPAR yes 33264940 3884 95345857
chr9 33268826 33268840 IRF8 JASPAR yes 33264940 3886 95345858
SNPs associated with CHMP5[ENSG00000086065.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr9 33442998 rs2231230 G A 161021 Esophagus 0.07827 10996572
chr9 32343176 rs117197837 T C 921764 Heart 0.0821847 10991885
chr9 33026121 rs16918953 G A 238819 Breast 0.215666 10994172
chr9 33225914 rs146448480 A C 39026 Liver 0.353752 10995551
chr9 33029081 rs79093542 C G 235859 Stomach 0.291947 10994209
Details of CHMP5[ENSG00000086065.9]
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Genomic Location chr9:33264940-33281977[+]
TSS 33264940
Gene Name CHMP5
Ensembl ID ENSG00000086065.9
ENTREZID 51510
Uniprot
Q9NZZ3
Protein Name
Charged multivesicular body protein 5
Expression levels of CHMP5[ENSG00000086065.9]
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