EnhancerDB
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Enhancers that regulate GABRP[ENSG00000094755.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr5 170103371 170103426 vista50092 170190354 86928
VISTA
chr5 170116730 170120880 enh72118 170190354 69474
Neural Stem Cells (H9)
chr5 170126558 170126578 vista50093 170190354 63776
VISTA
chr5 170134160 170134177 vista50094 170190354 56177
VISTA
chr5 170169329 170185295 enh63489 170190354 5059
Brain (SK-N-SH) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Stomach Thyroid Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
chr5 170172646 170172739 vista50095 170190354 17615
VISTA
chr5 170174489 170174734 vista50096 170190354 15620
VISTA
chr5 170177072 170177289 vista50097 170190354 13065
VISTA
chr5 170179191 170179549 vista50098 170190354 10805
VISTA
chr5 170188367 170188595 vista50099 170190354 1759
VISTA
chr5 170201305 170205455 enh106129 170190354 10951
Peripheral Blood (MM.1S)
chr5 170216445 170220595 enh88970 170190354 26091
Pancreas Epithelial (MCF-7)
chr5 170244965 170249115 enh110254 170190354 54611
Stomach
chr5 170261305 170265455 enh109019 170190354 70951
Lung (PC-9)
chr5 170268965 170273115 enh106130 170190354 78611
Peripheral Blood (MM.1S)
chr5 170273165 170277315 enh109020 170190354 82811
Lung (PC-9)
chr5 170289548 170289859 vista50100 170190354 99194
VISTA
Transcript facotrs that regulate GABRP[ENSG00000094755.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr5 170188386 170188390 LFA1 TRANSFAC yes 170190354 1964 70759559
chr5 170188394 170188398 YY1 TRANSFAC yes 170190354 1956 70759560
chr5 170188397 170188412 HNF4A JASPAR yes 170190354 1942 70759561
chr5 170188398 170188412 NR2F1 JASPAR yes 170190354 1942 70759562
chr5 170188398 170188413 HNF4G JASPAR yes 170190354 1941 70759563
chr5 170188405 170188417 ZBTB7A JASPAR yes 170190354 1937 70759564
chr5 170188406 170188418 ZBTB7C JASPAR yes 170190354 1936 70759565
chr5 170188412 170188423 FOS JASPAR yes 170190354 1931 70759566
chr5 170188412 170188423 FOSL1 JASPAR yes 170190354 1931 70759567
chr5 170188412 170188423 JUND JASPAR yes 170190354 1931 70759568
chr5 170188412 170188423 NFE2 JASPAR yes 170190354 1931 70759569
chr5 170188413 170188424 FOSL2 JASPAR yes 170190354 1930 70759570
chr5 170188413 170188424 JUNB JASPAR yes 170190354 1930 70759571
chr5 170188413 170188427 JUN JASPAR yes 170190354 1927 70759572
chr5 170188428 170188433 TFAP2A TRANSFAC yes 170190354 1921 70759573
chr5 170188428 170188434 MZF1 JASPAR yes 170190354 1920 70759574
chr5 170188429 170188447 ESR2 JASPAR yes 170190354 1907 70759575
chr5 170188430 170188445 ESR2 JASPAR yes 170190354 1909 70759576
chr5 170188431 170188436 GATA2 JASPAR yes 170190354 1918 70759577
chr5 170188438 170188452 RORA JASPAR yes 170190354 1902 70759578
chr5 170188439 170188449 RORA JASPAR yes 170190354 1905 70759579
chr5 170188446 170188456 POU6F2 JASPAR yes 170190354 1898 70759580
chr5 170188461 170188473 NHLH1 JASPAR yes 170190354 1881 70759581
chr5 170188464 170188469 USF2 TRANSFAC yes 170190354 1885 70759582
chr5 170188476 170188485 UEF3 TRANSFAC yes 170190354 1869 70759583
chr5 170188487 170188508 IRF1 JASPAR yes 170190354 1846 70759584
chr5 170188488 170188493 ETS2 TRANSFAC yes 170190354 1861 70759585
chr5 170188489 170188504 PRDM1 JASPAR yes 170190354 1850 70759586
chr5 170188495 170188506 FLI1 JASPAR yes 170190354 1848 70759587
chr5 170188496 170188500 YY1 TRANSFAC yes 170190354 1854 70759588
chr5 170188496 170188506 ETV6 JASPAR yes 170190354 1848 70759589
chr5 170188496 170188511 STAT1 JASPAR yes 170190354 1843 70759590
chr5 170188497 170188505 FEV JASPAR yes 170190354 1849 70759591
chr5 170188499 170188506 SPIB JASPAR yes 170190354 1848 70759592
chr5 170188511 170188522 USF1 JASPAR yes 170190354 1832 70759593
chr5 170188511 170188522 USF2 JASPAR yes 170190354 1832 70759594
chr5 170188512 170188519 USF2 TRANSFAC yes 170190354 1835 70759595
chr5 170188514 170188519 USF2 TRANSFAC yes 170190354 1835 70759596
chr5 170188539 170188547 FEV JASPAR yes 170190354 1807 70759597
chr5 170188560 170188574 JUN JASPAR yes 170190354 1780 70759598
chr5 170188562 170188573 BATF JASPAR yes 170190354 1781 70759599
chr5 170188563 170188574 FOSL2 JASPAR yes 170190354 1780 70759600
chr5 170188563 170188574 JUNB JASPAR yes 170190354 1780 70759601
chr5 170188564 170188575 FOSL1 JASPAR yes 170190354 1779 70759602
chr5 170188566 170188572 JUN TRANSFAC yes 170190354 1782 70759603
SNPs associated with GABRP[ENSG00000094755.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr5 170219678 rs3828621 G A 0 Heart 0.000245902 8692701
chr5 170179348 rs10475956 C G 11006 Pancreas 0.0058234 8692485
chr5 170216812 rs1862241 C A,T 0 Breast 0.163746 8692663
chr5 169943512 rs73313445 G T 246842 Ovary 0.429368 8691514
chr5 170170608 rs61375371 G C 19746 Liver 0.0248263 8692354
chr5 170203020 rs7722732 G A 0 Lung 0.0120407 8692614
chr5 170960954 rs66486128 TGTCATTTCC T 719903 Adrenal 0.136561 8694936
Details of GABRP[ENSG00000094755.12]
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Genomic Location chr5:170190354-170241051[+]
TSS 170190354
Gene Name GABRP
Ensembl ID ENSG00000094755.12
ENTREZID 2568
Uniprot
O00591
E7EWG0
B4DTP4
Protein Name
Gamma-aminobutyric acid receptor subunit pi
Expression levels of GABRP[ENSG00000094755.12]
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