EnhancerDB
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Enhancers that regulate KCNN1[ENSG00000105642.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 17972645 17977295 enh108720 18062102 84807
Cervix (HeLa-S3) Lung (PC-9)
chr19 18011544 18022439 enh44632 18062102 39663
Prostate (RWPE1) Esophagus Lung (PC-9) Pancreas Muscle (Myotube)
chr19 18024805 18029695 enh81496 18062102 32407
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Lung (PC-9) Stomach
chr19 18031925 18036075 enh86313 18062102 26027
Colon (HCT116)
chr19 18051905 18056299 enh89934 18062102 5803
Bone Marrow (K562) Prostate (RWPE1)
chr19 18059806 18059879 vista28877 18062102 2223
VISTA
chr19 18064785 18064952 vista28878 18062102 2683
VISTA
chr19 18071045 18077435 enh76115 18062102 8943
Muscle (A673)
chr19 18078845 18082995 enh91216 18062102 16743
Bone Marrow (K562)
chr19 18111465 18115615 enh5043 18062102 49363
Blood (Karpas-422)
chr19 18123185 18136964 enh17971 18062102 61083
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 18125171 18125343 vista28879 18062102 63069
VISTA
chr19 18128099 18128520 vista28880 18062102 65997
VISTA
chr19 18131070 18131394 vista28881 18062102 68968
VISTA
chr19 18131991 18132570 vista28882 18062102 69889
VISTA
chr19 18133045 18133309 vista28883 18062102 70943
VISTA
chr19 18134654 18135106 vista28884 18062102 72552
VISTA
chr19 18138570 18147995 enh44633 18062102 76468
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Stomach Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
chr19 18153705 18166715 enh17972 18062102 91603
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Lung Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
chr19 18154526 18154804 vista28885 18062102 92424
VISTA
chr19 18155923 18156099 vista28886 18062102 93821
VISTA
chr19 18160238 18160511 vista28887 18062102 98136
VISTA
Transcript facotrs that regulate KCNN1[ENSG00000105642.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 18057928 18059907 ZNF274 GTRD no Cervix (HeLa-S3) 18062102 2195 108395631
chr19 18057966 18059830 ZBTB33 GTRD no Lung (A549) 18062102 2272 108395632
chr19 18057973 18059889 ZBTB33 GTRD no Lung (A549) 18062102 2213 108395633
chr19 18059086 18059913 TCF7L2 GTRD no Colon (HCT116) 18062102 2189 108395634
chr19 18059234 18060350 ZNF274 GTRD no Cervix (HeLa-S3) 18062102 1752 108395635
chr19 18059483 18064087 EZH2 UCSC Txn Factor no Conserved 18062102 1985 108395636
chr19 18059695 18060832 TCF7L2 GTRD no Colon (HCT116) 18062102 1270 108395637
chr19 18059714 18060294 ZNF274 GTRD no Blood (GM12878) 18062102 1808 108395638
chr19 18059725 18060274 TCF7L2 GTRD no Colon (HCT116) 18062102 1828 108395639
chr19 18059760 18060916 ZNF274 GTRD no Bone Marrow (K562) 18062102 1186 108395640
chr19 18059787 18060221 ZNF274 GTRD no Bone Marrow (K562) 18062102 1881 108395641
chr19 18059806 18059826 RREB1 JASPAR yes 18062102 2276 70819738
chr19 18059808 18059818 SP1 JASPAR yes 18062102 2284 70819739
chr19 18059808 18059818 SP1 TRANSFAC yes 18062102 2284 70819740
chr19 18059809 18059819 SP1 JASPAR yes 18062102 2283 70819741
chr19 18059811 18059821 ZNF740 JASPAR yes 18062102 2281 70819742
chr19 18059812 18059822 ZNF740 JASPAR yes 18062102 2280 70819743
chr19 18059817 18059821 H1TF2 TRANSFAC yes 18062102 2281 70819744
chr19 18059817 18059821 NFE TRANSFAC yes 18062102 2281 70819745
chr19 18059817 18059821 SRF TRANSFAC yes 18062102 2281 70819746
chr19 18059817 18060607 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 18062102 1495 108395642
chr19 18059826 18059838 TAL1 JASPAR yes 18062102 2264 70819747
chr19 18059828 18059838 NEUROG2 JASPAR yes 18062102 2264 70819748
chr19 18059833 18059837 NFE TRANSFAC yes 18062102 2265 70819749
chr19 18059839 18059843 NFE TRANSFAC yes 18062102 2259 70819750
chr19 18059840 18059845 GATA2 JASPAR yes 18062102 2257 70819751
chr19 18059857 18059869 HINFP JASPAR yes 18062102 2233 70819752
chr19 18059868 18059878 GABPA JASPAR yes 18062102 2224 70819753
chr19 18059870 18059876 ETS1 JASPAR yes 18062102 2226 70819754
chr19 18059870 18059876 SPI1 JASPAR yes 18062102 2226 70819755
chr19 18064402 18065020 TCF7L2 GTRD no Colon (HCT116) 18062102 2300 108395643
chr19 18064450 18065426 TCF7L2 GTRD no Colon (HCT116) 18062102 2348 108395644
chr19 18064526 18065693 ZNF274 GTRD no Bone Marrow (K562) 18062102 2424 108395645
chr19 18064548 18065535 ZNF274 GTRD no Bone Marrow (K562) 18062102 2446 108395646
chr19 18064581 18065454 ZNF274 GTRD no Liver (HepG2) 18062102 2479 108395647
chr19 18064601 18065329 ZNF274 GTRD no Bone Marrow (K562) 18062102 2499 108395648
chr19 18064613 18065569 ZNF274 GTRD no Bone Marrow (K562) 18062102 2511 108395649
chr19 18064624 18065342 ZNF143 GTRD no Epithelial (MCF-7) 18062102 2522 108395650
chr19 18064627 18065406 ZNF274 GTRD no Liver (HepG2) 18062102 2525 108395651
chr19 18064646 18065495 ZBTB33 GTRD no Lung (A549) 18062102 2544 108395652
chr19 18064647 18065558 ZNF274 GTRD no Bone Marrow (K562) 18062102 2545 108395653
chr19 18064648 18065200 ZNF274 GTRD no Liver (HepG2) 18062102 2546 108395654
chr19 18064648 18065548 ZNF274 GTRD no Bone Marrow (K562) 18062102 2546 108395655
chr19 18064650 18065481 ZNF274 GTRD no Liver (HepG2) 18062102 2548 108395656
chr19 18064651 18065652 ZNF143 GTRD no Epithelial (MCF-7) 18062102 2549 108395657
chr19 18064657 18065249 ZBTB33 GTRD no Lung (A549) 18062102 2555 108395658
chr19 18064657 18065558 ZNF274 GTRD no Bone Marrow (K562) 18062102 2555 108395659
chr19 18064671 18065375 ZNF274 GTRD no Bone Marrow (K562) 18062102 2569 108395660
chr19 18064672 18065334 ZNF274 GTRD no Liver (HepG2) 18062102 2570 108395661
chr19 18064675 18065308 ZBTB33 GTRD no Lung (A549) 18062102 2573 108395662
chr19 18064676 18065150 ZBTB33 GTRD no Lung (A549) 18062102 2574 108395663
chr19 18064685 18065205 ZNF274 GTRD no Liver (HepG2) 18062102 2583 108395664
chr19 18064686 18065198 ZNF274 GTRD no Liver (HepG2) 18062102 2584 108395665
chr19 18064691 18064935 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18062102 2589 108395666
chr19 18064692 18065062 ZNF274 GTRD no Liver (HepG2) 18062102 2590 108395667
chr19 18064693 18065538 ZNF274 GTRD no Liver (HepG2) 18062102 2591 108395668
chr19 18064694 18065211 ZNF274 GTRD no Liver (HepG2) 18062102 2592 108395669
chr19 18064697 18065264 ZNF143 GTRD no Epithelial (MCF-7) 18062102 2595 108395670
chr19 18064703 18065543 ZNF274 GTRD no Bone Marrow (K562) 18062102 2601 108395671
chr19 18064704 18065236 ZNF274 GTRD no Bone Marrow (K562) 18062102 2602 108395672
chr19 18064710 18065080 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18062102 2608 108395673
chr19 18064716 18065176 ZNF274 GTRD no Bone Marrow (K562) 18062102 2614 108395674
chr19 18064718 18065410 ZNF274 GTRD no Blood (GM12878) 18062102 2616 108395675
chr19 18064723 18065213 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18062102 2621 108395676
chr19 18064724 18065138 ZNF274 GTRD no Cervix (HeLa-S3) 18062102 2622 108395677
chr19 18064724 18065155 ZNF274 GTRD no Bone Marrow (K562) 18062102 2622 108395678
chr19 18064727 18065544 ZNF143 GTRD no Epithelial (MCF-7) 18062102 2625 108395679
chr19 18064732 18065236 ZNF274 GTRD no Bone Marrow (K562) 18062102 2630 108395680
chr19 18064734 18065206 ZBTB33 GTRD no Brain (SK-N-SH) 18062102 2632 108395681
chr19 18064741 18065460 ZNF274 GTRD no Bone Marrow (K562) 18062102 2639 108395682
chr19 18064748 18065161 ZNF274 GTRD no Liver (HepG2) 18062102 2646 108395683
chr19 18064759 18065251 ZNF274 GTRD no Liver (HepG2) 18062102 2657 108395684
chr19 18064759 18065313 ZBTB33 GTRD no Brain (SK-N-SH) 18062102 2657 108395685
chr19 18064760 18065208 ZNF274 GTRD no Liver (HepG2) 18062102 2658 108395686
chr19 18064762 18065202 ZNF143 GTRD no Epithelial (MCF-7) 18062102 2660 108395687
chr19 18064764 18065215 ZNF274 GTRD no Blood (GM12878) 18062102 2662 108395688
chr19 18064765 18065251 ZNF274 GTRD no Liver (HepG2) 18062102 2663 108395689
chr19 18064765 18065326 ZNF274 GTRD no Bone Marrow (K562) 18062102 2663 108395690
chr19 18064770 18065201 ZNF274 GTRD no Bone Marrow (K562) 18062102 2668 108395691
chr19 18064770 18065273 ZNF274 GTRD no Liver (HepG2) 18062102 2668 108395692
chr19 18064776 18065052 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18062102 2674 108395693
chr19 18064780 18065156 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 18062102 2678 108395694
chr19 18064793 18064814 ZNF263 JASPAR yes 18062102 2691 70819756
chr19 18064793 18065227 ZNF274 GTRD no Cervix (HeLa-S3) 18062102 2691 108395695
chr19 18064813 18065425 ZNF274 GTRD no Bone Marrow (K562) 18062102 2711 108395696
chr19 18064816 18065190 ZNF274 GTRD no Bone Marrow (K562) 18062102 2714 108395697
chr19 18064819 18064827 GATA3 JASPAR yes 18062102 2717 70819757
chr19 18064822 18064838 SOX8 JASPAR yes 18062102 2720 70819758
chr19 18064825 18065018 ZNF274 GTRD no Liver (HepG2) 18062102 2723 108395698
chr19 18064852 18065463 ZNF274 GTRD no Bone Marrow (K562) 18062102 2750 108395699
chr19 18064853 18065493 ZNF274 GTRD no Bone Marrow (K562) 18062102 2751 108395700
chr19 18064855 18065224 ZNF143 GTRD no Epithelial (MCF-7) 18062102 2753 108395701
chr19 18064857 18064878 ZNF263 JASPAR yes 18062102 2755 70819759
chr19 18064864 18065392 ZNF274 GTRD no Bone Marrow (K562) 18062102 2762 108395702
chr19 18064866 18064880 PLAG1 JASPAR yes 18062102 2764 70819760
chr19 18064867 18064882 TFAP2A JASPAR yes 18062102 2765 70819761
chr19 18064867 18064882 TFAP2C JASPAR yes 18062102 2765 70819762
chr19 18064875 18064881 MAZ TRANSFAC yes 18062102 2773 70819763
chr19 18064878 18064899 ZNF263 JASPAR yes 18062102 2776 70819764
chr19 18064878 18065221 ZNF274 GTRD no Bone Marrow (K562) 18062102 2776 108395703
chr19 18064890 18064908 ESR1 JASPAR yes 18062102 2788 70819765
chr19 18064893 18064898 SP1 TRANSFAC yes 18062102 2791 70819766
chr19 18064897 18064916 REST JASPAR yes 18062102 2795 70819767
chr19 18064903 18064912 TFAP2A JASPAR yes 18062102 2801 70819768
chr19 18064920 18065217 ZNF274 GTRD no Bone Marrow (K562) 18062102 2818 108395704
chr19 18064921 18064932 NFE2L2 JASPAR yes 18062102 2819 70819769
SNPs associated with KCNN1[ENSG00000105642.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of KCNN1[ENSG00000105642.11]
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Genomic Location chr19:18062102-18110889[+]
TSS 18062102
Gene Name KCNN1
Ensembl ID ENSG00000105642.11
ENTREZID 3780
Uniprot
Q92952
Protein Name
Small conductance calcium-activated potassium channel protein 1
Expression levels of KCNN1[ENSG00000105642.11]
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