EnhancerDB
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Enhancers that regulate TBC1D13[ENSG00000107021.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr9 131443625 131450595 enh11001 131549483 98888
Uterus Blood (Karpas-422)
chr9 131521405 131530035 enh57169 131549483 19448
Bone Marrow (K562) Liver (HepG2) Large Intestine
chr9 131543592 131543786 vista63527 131549483 5697
VISTA
chr9 131545917 131546049 vista63528 131549483 3434
VISTA
chr9 131560607 131560712 vista63529 131549483 11124
VISTA
chr9 131586669 131590901 enh90571 131549483 37186
Prostate (RWPE1)
chr9 131602365 131606515 enh93845 131549483 52882
Liver (HepG2)
chr9 131620565 131643755 enh11002 131549483 71082
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Thymus Heart
chr9 131637939 131638335 vista63530 131549483 88456
VISTA
chr9 131645612 131645749 vista63531 131549483 96129
VISTA
chr9 131646405 131668633 enh26044 131549483 96922
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
Transcript facotrs that regulate TBC1D13[ENSG00000107021.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr9 131545785 131546090 MAFK UCSC Txn Factor no Conserved 131549483 3393 108552099
chr9 131545790 131546066 MAFF UCSC Txn Factor no Conserved 131549483 3417 108552100
chr9 131545921 131545939 MAFF JASPAR yes 131549483 3544 95425726
chr9 131545923 131545934 NRL JASPAR yes 131549483 3549 95425727
chr9 131545923 131545938 MAFK JASPAR yes 131549483 3545 95425728
chr9 131545924 131545938 JUN JASPAR yes 131549483 3545 95425729
chr9 131545926 131545937 BATF JASPAR yes 131549483 3546 95425730
chr9 131545927 131545938 JUNB JASPAR yes 131549483 3545 95425731
chr9 131545927 131545938 NFE2L2 JASPAR yes 131549483 3545 95425732
chr9 131545928 131545939 FOS JASPAR yes 131549483 3544 95425733
chr9 131545928 131545939 FOSL1 JASPAR yes 131549483 3544 95425734
chr9 131545928 131545939 JUND JASPAR yes 131549483 3544 95425735
chr9 131545928 131545939 NFE2 JASPAR yes 131549483 3544 95425736
chr9 131545929 131545938 JDP2 JASPAR yes 131549483 3545 95425737
chr9 131545929 131545940 FOSL2 JASPAR yes 131549483 3543 95425738
chr9 131545929 131545940 JUNB JASPAR yes 131549483 3543 95425739
chr9 131545929 131545943 JUN JASPAR yes 131549483 3540 95425740
chr9 131545944 131545959 MEF2A JASPAR yes 131549483 3524 95425741
chr9 131545946 131545958 MEF2B JASPAR yes 131549483 3525 95425742
chr9 131545948 131545956 FOXL1 JASPAR yes 131549483 3527 95425743
chr9 131545950 131545958 FOXO3 JASPAR yes 131549483 3525 95425744
chr9 131545969 131545973 NFE TRANSFAC yes 131549483 3510 95425745
chr9 131545978 131545982 YY1 TRANSFAC yes 131549483 3501 95425746
chr9 131545979 131545989 NFATC3 JASPAR yes 131549483 3494 95425747
chr9 131545980 131545987 NFATC2 JASPAR yes 131549483 3496 95425748
chr9 131545980 131545999 RFX2 JASPAR yes 131549483 3484 95425749
chr9 131545987 131545999 NHLH1 JASPAR yes 131549483 3484 95425750
chr9 131545988 131545998 NHLH1 JASPAR yes 131549483 3485 95425751
chr9 131545999 131546003 YY1 TRANSFAC yes 131549483 3480 95425752
chr9 131546027 131546041 GATA2 JASPAR yes 131549483 3442 95425753
chr9 131546033 131546037 NFE TRANSFAC yes 131549483 3446 95425754
chr9 131546033 131546038 GATA1 TRANSFAC yes 131549483 3445 95425755
chr9 131546033 131546039 GATA3 JASPAR yes 131549483 3444 95425756
SNPs associated with TBC1D13[ENSG00000107021.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr9 131486769 rs111925909 C T 62714 Esophagus 0.0153199 11316924
chr9 132456295 rs77561228 G A 883584 Esophagus 0.138594 11325510
chr9 131989949 rs141088487 C T 417238 Heart 0.345449 11319317
chr9 132005603 rs17510037 T C 432892 Pancreas 0.131725 11319455
chr9 131674655 rs10988152 C T 101944 Breast 0.0945306 11317799
chr9 132075148 rs10988316 T A 502437 Ovary 0.0930693 11320271
chr9 130598063 rs141099307 G A 951420 Thyroid 0.0708822 11312153
chr9 132547540 rs115556035 C T 974829 Liver 0.395805 11326633
chr9 130792491 rs150122326 G A 756992 Lung 0.323946 11313971
chr9 132182882 rs28361707 C A 610171 Stomach 0.193468 11321928
chr9 130787509 rs10987837 C T 761974 Adrenal 0.244007 11313866
Details of TBC1D13[ENSG00000107021.11]
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Genomic Location chr9:131549483-131572711[+]
TSS 131549483
Gene Name TBC1D13
Ensembl ID ENSG00000107021.11
ENTREZID 54662
Uniprot
B4DHM6
A0A024R8C8
Q9NVG8
B3KNG3
A0A024R8B1
Protein Name
isoform CRA_a
isoform CRA_b
member 13
member 13
TBC1 domain family
TBC1 domain family
TBC1 domain family member 13
Expression levels of TBC1D13[ENSG00000107021.11]
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