EnhancerDB
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Enhancers that regulate GALNT18[ENSG00000110328.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 11538764 11544136 enh58324 11643552 99416
Skin (Keratinocyte) Prostate (RWPE1)
chr11 11544305 11548455 enh79791 11643552 95097
Prostate (PC-3)
chr11 11547720 11547907 vista9655 11643552 95645
VISTA
chr11 11550772 11562235 enh50709 11643552 81317
Ovary Large Intestine Stomach Thyroid Pancreas Uterus Heart
chr11 11563310 11568904 enh64422 11643552 74648
Heart
chr11 11572285 11582242 enh50710 11643552 61310
Pancreas Prostate (RWPE1) Thyroid Large Intestine
chr11 11582865 11587015 enh101244 11643552 56537
Thyroid
chr11 11587341 11612775 enh13771 11643552 30777
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Pancreas Spleen Neural Stem Cells (H9) Thymus Heart
chr11 11624225 11638915 enh13772 11643552 4637
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Heart
chr11 11641691 11641934 vista9656 11643552 1618
VISTA
chr11 11661229 11665379 enh62128 11643552 17677
Esophagus
chr11 11713463 11713705 vista9657 11643552 69911
VISTA
chr11 11730348 11730724 vista9658 11643552 86796
VISTA
chr11 11736867 11741315 enh58325 11643552 93315
Skin (Keratinocyte) Prostate (RWPE1)
Transcript facotrs that regulate GALNT18[ENSG00000110328.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr11 11638549 11638564 SOX21 JASPAR yes 11643552 4988 37394733
chr11 11638549 11638565 SOX4 JASPAR yes 11643552 4987 37394734
chr11 11638556 11638577 MAFG JASPAR yes 11643552 4975 37394735
chr11 11638579 11638589 NFATC3 JASPAR yes 11643552 4963 37394736
chr11 11638584 11638588 H1TF2 TRANSFAC yes 11643552 4964 37394737
chr11 11638584 11638588 NFE TRANSFAC yes 11643552 4964 37394738
chr11 11638584 11638588 SRF TRANSFAC yes 11643552 4964 37394739
chr11 11638587 11638603 POU4F2 JASPAR yes 11643552 4949 37394740
chr11 11638594 11638609 FOXP1 JASPAR yes 11643552 4943 37394741
chr11 11638595 11638606 FOXA1 JASPAR yes 11643552 4946 37394742
chr11 11638597 11638608 FOXP2 JASPAR yes 11643552 4944 37394743
chr11 11638598 11638612 SPI1 JASPAR yes 11643552 4940 37394744
chr11 11638598 11638613 STAT2 JASPAR yes 11643552 4939 37394745
chr11 11638604 11638621 ZNF410 JASPAR yes 11643552 4931 37394746
chr11 11638606 11638615 SOX9 JASPAR yes 11643552 4937 37394747
chr11 11638614 11638619 GATA2 JASPAR yes 11643552 4933 37394748
chr11 11638614 11638631 ZNF410 JASPAR yes 11643552 4921 37394749
chr11 11638638 11638643 ETS2 TRANSFAC yes 11643552 4909 37394750
chr11 11638651 11638669 NFYA JASPAR yes 11643552 4883 37394751
chr11 11638657 11638661 H1TF2 TRANSFAC yes 11643552 4891 37394752
chr11 11638657 11638661 NFE TRANSFAC yes 11643552 4891 37394753
chr11 11638657 11638661 SRF TRANSFAC yes 11643552 4891 37394754
chr11 11638661 11638667 NFIC JASPAR yes 11643552 4885 37394755
chr11 11638682 11638697 HNF4A JASPAR yes 11643552 4855 37394756
chr11 11638683 11638698 HNF4G JASPAR yes 11643552 4854 37394757
chr11 11638724 11638728 YY1 TRANSFAC yes 11643552 4824 37394758
chr11 11638729 11638736 NFATC2 JASPAR yes 11643552 4816 37394759
chr11 11638730 11638738 FOXO3 JASPAR yes 11643552 4814 37394760
chr11 11638734 11638749 MEF2C JASPAR yes 11643552 4803 37394761
chr11 11638735 11638747 POU3F1 JASPAR yes 11643552 4805 37394762
chr11 11638735 11638747 POU3F2 JASPAR yes 11643552 4805 37394763
chr11 11638735 11638748 POU3F3 JASPAR yes 11643552 4804 37394764
chr11 11638736 11638740 YY1 TRANSFAC yes 11643552 4812 37394765
chr11 11638737 11638751 IRF7 JASPAR yes 11643552 4801 37394766
chr11 11638741 11638754 POU3F3 JASPAR yes 11643552 4798 37394767
chr11 11638742 11638753 FOXC1 JASPAR yes 11643552 4799 37394768
chr11 11638745 11638759 POU4F1 JASPAR yes 11643552 4793 37394769
chr11 11638745 11638761 POU4F2 JASPAR yes 11643552 4791 37394770
chr11 11638745 11638761 POU4F3 JASPAR yes 11643552 4791 37394771
chr11 11638750 11638754 YY1 TRANSFAC yes 11643552 4798 37394772
chr11 11638752 11638762 MNX1 JASPAR yes 11643552 4790 37394773
chr11 11638753 11638761 BARX1 JASPAR yes 11643552 4791 37394774
chr11 11638773 11638779 LEF1 TRANSFAC yes 11643552 4773 37394775
chr11 11638773 11638779 SOX10 JASPAR yes 11643552 4773 37394776
chr11 11638793 11638796 MYB TRANSFAC yes 11643552 4756 37394777
chr11 11638796 11638800 H1TF2 TRANSFAC yes 11643552 4752 37394778
chr11 11638796 11638800 NFE TRANSFAC yes 11643552 4752 37394779
chr11 11638796 11638800 SRF TRANSFAC yes 11643552 4752 37394780
chr11 11638809 11638812 MYB TRANSFAC yes 11643552 4740 37394781
chr11 11638813 11638816 MYB TRANSFAC yes 11643552 4736 37394782
chr11 11638849 11638855 SOX10 JASPAR yes 11643552 4697 37394783
chr11 11638858 11638869 FOXP2 JASPAR yes 11643552 4683 37394784
chr11 11638859 11638867 FOXO3 JASPAR yes 11643552 4685 37394785
chr11 11641695 11641971 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 11643552 1581 107958178
chr11 11641720 11641726 NFIC JASPAR yes 11643552 1826 114041668
chr11 11641739 11641754 HNF4A JASPAR yes 11643552 1798 114041669
chr11 11641740 11641754 NR2F1 JASPAR yes 11643552 1798 114041670
chr11 11641748 11642033 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 11643552 1519 107958179
chr11 11641748 11642410 E2F1 UCSC Txn Factor no Conserved 11643552 1142 107958180
chr11 11641754 11641759 SP1 TRANSFAC yes 11643552 1793 114041671
chr11 11641754 11642410 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 11643552 1142 107958181
chr11 11641781 11641801 TP53 JASPAR yes 11643552 1751 114041672
chr11 11641793 11641802 THAP1 JASPAR yes 11643552 1750 114041673
chr11 11641810 11641818 TBX5 JASPAR yes 11643552 1734 114041674
chr11 11641810 11641819 ZEB1 JASPAR yes 11643552 1733 114041675
chr11 11641810 11641823 ZBTB18 JASPAR yes 11643552 1729 114041676
chr11 11641811 11641821 FIGLA JASPAR yes 11643552 1731 114041677
chr11 11641811 11641821 ID4 JASPAR yes 11643552 1731 114041678
chr11 11641811 11641821 TCF3 JASPAR yes 11643552 1731 114041679
chr11 11641811 11641821 TCF4 JASPAR yes 11643552 1731 114041680
chr11 11641813 11641818 USF2 TRANSFAC yes 11643552 1734 114041681
chr11 11641823 11641844 ZNF263 JASPAR yes 11643552 1708 114041682
chr11 11641829 11641850 ZNF263 JASPAR yes 11643552 1702 114041683
chr11 11641831 11644000 POLR2A UCSC Txn Factor no Conserved 11643552 448 107958182
chr11 11641836 11641846 SP1 JASPAR yes 11643552 1706 114041684
chr11 11641836 11641857 ZNF263 JASPAR yes 11643552 1695 114041685
chr11 11641837 11641846 SP1 TRANSFAC yes 11643552 1706 114041686
chr11 11641838 11641844 MAZ TRANSFAC yes 11643552 1708 114041687
chr11 11641841 11641854 ELF1 JASPAR yes 11643552 1698 114041688
chr11 11641844 11641850 PEA3 TRANSFAC yes 11643552 1702 114041689
chr11 11641844 11641854 ETV6 JASPAR yes 11643552 1698 114041690
chr11 11641844 11641855 FLI1 JASPAR yes 11643552 1697 114041691
chr11 11641845 11641853 EHF JASPAR yes 11643552 1699 114041692
chr11 11641846 11641853 SPI1 JASPAR yes 11643552 1699 114041693
chr11 11641861 11641872 NRF1 JASPAR yes 11643552 1680 114041694
chr11 11641863 11641874 NRF1 JASPAR yes 11643552 1678 114041695
chr11 11641864 11641875 NRF1 JASPAR yes 11643552 1677 114041696
chr11 11641865 11641876 NRF1 JASPAR yes 11643552 1676 114041697
chr11 11641866 11641877 NRF1 JASPAR yes 11643552 1675 114041698
chr11 11641867 11641878 NRF1 JASPAR yes 11643552 1674 114041699
chr11 11641868 11641879 NRF1 JASPAR yes 11643552 1673 114041700
chr11 11641869 11641880 NRF1 JASPAR yes 11643552 1672 114041701
chr11 11641870 11641881 NRF1 JASPAR yes 11643552 1671 114041702
chr11 11641894 11641908 MTF1 JASPAR yes 11643552 1644 114041703
chr11 11641915 11641926 E2F1 JASPAR yes 11643552 1626 114041704
SNPs associated with GALNT18[ENSG00000110328.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 11644600 rs10765875 G A 1048 Esophagus 7.48274e-17 1850803
chr11 11593982 rs7118819 C T 0 Esophagus 1.61981e-08 1850206
chr11 11593982 rs7118819 C T 0 Esophagus 8.24297e-11 1850206
chr11 11429150 rs11021836 G A 0 Heart 1.82074e-05 1848351
chr11 11426765 rs371771312 A AC 0 Heart 0.00150836 1848310
chr11 11606095 rs57250050 T C 0 Pancreas 0.0817472 1850419
chr11 11644600 rs10765875 G A 1048 Breast 1.31708e-26 1850803
chr11 11304484 rs113796044 C CA 0 Spleen 0.0833792 1847472
chr11 12076304 rs56037157 A G 432752 Ovary 0.23589 1852948
chr11 12170824 rs55826658 G A 527272 Uterus 0.118075 1854270
chr11 11644600 rs10765875 G A 1048 Thyroid 6.6136e-19 1850803
chr11 11458440 rs7481541 G C 0 Liver 0.464362 1848720
chr11 11603294 rs61870383 T A,C 0 Lung 0.00631351 1850378
chr11 12440940 rs7949736 A G 797388 Stomach 0.369347 1856848
chr11 11644600 rs10765875 G A 1048 Adrenal 3.63925e-05 1850803
Details of GALNT18[ENSG00000110328.5]
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Genomic Location chr11:11292423-11643552[-]
TSS 11643552
Gene Name GALNT18
Ensembl ID ENSG00000110328.5
ENTREZID 374378
Uniprot
Q6P9A2
Q58A54
Protein Name
Polypeptide N-acetylgalactosaminyltransferase
Polypeptide N-acetylgalactosaminyltransferase 18
Expression levels of GALNT18[ENSG00000110328.5]
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