EnhancerDB
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Enhancers that regulate SRSF3[ENSG00000112081.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 36470125 36474275 enh55726 36562145 87870
Large Intestine
chr6 36493365 36498202 enh66198 36562145 63943
Heart
chr6 36502765 36506915 enh84150 36562145 55230
Prostate (PC-3)
chr6 36510045 36514215 enh9085 36562145 47930
Uterus Blood (Karpas-422)
chr6 36523625 36529416 enh61383 36562145 32729
Prostate (PC-3) Esophagus Blood (OCI-LY7) Stomach Lung (PC-9) Epithelial (MCF-7)
chr6 36532405 36555595 enh23192 36562145 6550
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
chr6 36547678 36548077 vista51752 36562145 14068
VISTA
chr6 36560154 36560313 vista51753 36562145 1832
VISTA
chr6 36569515 36588579 enh23193 36562145 7370
Liver Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr6 36588913 36599195 enh23194 36562145 26768
Cervix (HeLa-S3) Kidney Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
chr6 36596849 36597094 vista51754 36562145 34704
VISTA
chr6 36599305 36604983 enh66199 36562145 37160
Liver Bone (Osteoblast) Stomach Pancreas Heart Epithelial (MCF-7)
chr6 36607445 36614670 enh23195 36562145 45300
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Breast Muscle (Myoblast) Pancreas Uterus Stomach
chr6 36614945 36639164 enh9086 36562145 52800
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr6 36628616 36629003 vista51755 36562145 66471
VISTA
chr6 36634782 36635224 vista51756 36562145 72637
VISTA
chr6 36641925 36649995 enh49088 36562145 79780
Uterus Thymus Prostate (RWPE1)
chr6 36655138 36663242 enh66200 36562145 92993
Colon (HCT116) Blood (T-cell) Lung (PC-9) Heart
chr6 36656050 36656213 vista51757 36562145 93905
VISTA
chr6 36660058 36660307 vista51758 36562145 97913
VISTA
Transcript facotrs that regulate SRSF3[ENSG00000112081.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 36560096 36560361 RUNX3 UCSC Txn Factor no Conserved 36562145 1784 108539932
chr6 36560154 36560157 MYB TRANSFAC yes 36562145 1988 70354699
chr6 36560154 36560169 MEF2C JASPAR yes 36562145 1976 70354700
chr6 36560155 36560170 MEF2A JASPAR yes 36562145 1975 70354701
chr6 36560156 36560168 MEF2A JASPAR yes 36562145 1977 70354702
chr6 36560156 36560168 MEF2B JASPAR yes 36562145 1977 70354703
chr6 36560156 36560168 MEF2D JASPAR yes 36562145 1977 70354704
chr6 36560157 36560167 MEF2A JASPAR yes 36562145 1978 70354705
chr6 36560158 36560172 FOXF2 JASPAR yes 36562145 1973 70354706
chr6 36560158 36560173 FOXP1 JASPAR yes 36562145 1972 70354707
chr6 36560159 36560170 FOXA1 JASPAR yes 36562145 1975 70354708
chr6 36560159 36560174 FOXA1 JASPAR yes 36562145 1971 70354709
chr6 36560160 36560171 FOXB1 JASPAR yes 36562145 1974 70354710
chr6 36560160 36560171 FOXC1 JASPAR yes 36562145 1974 70354711
chr6 36560160 36560172 FOXC2 JASPAR yes 36562145 1973 70354712
chr6 36560161 36560172 FOXP2 JASPAR yes 36562145 1973 70354713
chr6 36560161 36560173 FOXI1 JASPAR yes 36562145 1972 70354714
chr6 36560163 36560171 FOXG1 JASPAR yes 36562145 1974 70354715
chr6 36560163 36560171 FOXO3 JASPAR yes 36562145 1974 70354716
chr6 36560164 36560175 FOXC1 JASPAR yes 36562145 1970 70354717
chr6 36560165 36560177 FOXI1 JASPAR yes 36562145 1968 70354718
chr6 36560172 36560180 FOXL1 JASPAR yes 36562145 1965 70354719
chr6 36560203 36560218 TFAP2C JASPAR yes 36562145 1927 70354720
chr6 36560204 36560213 TFAP2A JASPAR yes 36562145 1932 70354721
chr6 36560204 36560215 EBF1 JASPAR yes 36562145 1930 70354722
chr6 36560208 36560213 TFAP2A TRANSFAC yes 36562145 1932 70354723
chr6 36560208 36560214 MZF1 JASPAR yes 36562145 1931 70354724
chr6 36560214 36560223 SNAI2 JASPAR yes 36562145 1922 70354725
chr6 36560214 36560224 ID4 JASPAR yes 36562145 1921 70354726
chr6 36560214 36560224 TCF3 JASPAR yes 36562145 1921 70354727
chr6 36560214 36560224 TCF4 JASPAR yes 36562145 1921 70354728
chr6 36560216 36560225 ZEB1 JASPAR yes 36562145 1920 70354729
chr6 36560216 36560226 TBX21 JASPAR yes 36562145 1919 70354730
chr6 36560216 36560229 EOMES JASPAR yes 36562145 1916 70354731
chr6 36560217 36560225 MGA JASPAR yes 36562145 1920 70354732
chr6 36560217 36560225 TBX15 JASPAR yes 36562145 1920 70354733
chr6 36560217 36560225 TBX1 JASPAR yes 36562145 1920 70354734
chr6 36560217 36560225 TBX4 JASPAR yes 36562145 1920 70354735
chr6 36560217 36560225 TBX5 JASPAR yes 36562145 1920 70354736
chr6 36560217 36560227 TBR1 JASPAR yes 36562145 1918 70354737
chr6 36560221 36560233 GLI2 JASPAR yes 36562145 1912 70354738
chr6 36560222 36560232 RUNX3 JASPAR yes 36562145 1913 70354739
chr6 36560222 36560233 RUNX1 JASPAR yes 36562145 1912 70354740
chr6 36560250 36560262 TAL1 JASPAR yes 36562145 1883 70354741
chr6 36560251 36560254 MYB TRANSFAC yes 36562145 1891 70354742
chr6 36560251 36560263 TGIF1 JASPAR yes 36562145 1882 70354743
chr6 36560251 36560264 ZBTB18 JASPAR yes 36562145 1881 70354744
chr6 36560260 36560263 MYB TRANSFAC yes 36562145 1882 70354745
chr6 36560270 36560282 INSM1 JASPAR yes 36562145 1863 70354746
chr6 36560280 36560284 YY1 TRANSFAC yes 36562145 1861 70354747
chr6 36560286 36560300 SPIC JASPAR yes 36562145 1845 70354748
chr6 36560289 36560300 ETV2 JASPAR yes 36562145 1845 70354749
chr6 36560290 36560297 SPIB JASPAR yes 36562145 1848 70354750
chr6 36560290 36560301 FLI1 JASPAR yes 36562145 1844 70354751
chr6 36560291 36560299 FEV JASPAR yes 36562145 1846 70354752
SNPs associated with SRSF3[ENSG00000112081.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 36327100 rs12211236 C T 235045 Esophagus 0.292653 8992676
chr6 36637632 rs58470960 G A 64255 Uterus 0.284658 8995190
chr6 37145466 rs62408392 G A 572089 Thyroid 0.198797 8999545
chr6 36611868 rs9368944 T C 38491 Liver 0.458901 8994834
chr6 36525355 rs660639 G A 36790 Lung 0.248752 8993655
chr6 36589502 rs13215272 C T 16125 Stomach 0.231212 8994559
chr6 37088341 rs555535950 T C 514964 Adrenal 0.0269637 8998854
Details of SRSF3[ENSG00000112081.12]
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Genomic Location chr6:36562145-36573377[+]
TSS 36562145
Gene Name SRSF3
Ensembl ID ENSG00000112081.12
ENTREZID 6428
Uniprot
P84103
B2R6F3
Protein Name
Serine/arginine-rich splicing factor 3
Serine/arginine-rich-splicing factor 3
Expression levels of SRSF3[ENSG00000112081.12]
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