EnhancerDB
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Enhancers that regulate TSPO2[ENSG00000112212.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 40913705 40922075 enh38991 41010293 88218
Skin (Keratinocyte) Prostate (PC-3) Astrocyte Bone (Osteoblast) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9)
chr6 40922705 40932367 enh38992 41010293 77926
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1)
chr6 40938725 40942875 enh93492 41010293 67418
Liver (HepG2)
chr6 40948694 40953723 enh72243 41010293 56570
Neural Stem Cells (H9)
chr6 40955585 40959735 enh55744 41010293 50558
Large Intestine
chr6 40961545 40969515 enh38993 41010293 40778
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Esophagus Astrocyte Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Stomach
chr6 40964017 40964029 vista51886 41010293 46264
VISTA
chr6 40964511 40964818 vista51887 41010293 45475
VISTA
chr6 40965087 40965613 vista51888 41010293 44680
VISTA
chr6 40971985 40976135 enh55745 41010293 34158
Large Intestine
chr6 40979245 40986535 enh49099 41010293 23758
Pancreas Thymus Large Intestine
chr6 40987562 40993870 enh59617 41010293 16423
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Cervix (HeLa-S3) Pancreas (Panc1) Epithelial (MCF-7)
chr6 41008417 41008606 vista51889 41010293 1687
VISTA
chr6 41018885 41031175 enh23234 41010293 8592
Placenta Liver (HepG2) Large Intestine Stomach
chr6 41031279 41031297 vista51890 41010293 20986
VISTA
chr6 41038665 41046615 enh9100 41010293 28372
Blood (Karpas-422)
chr6 41076698 41081156 enh90380 41010293 66405
Prostate (RWPE1)
chr6 41085829 41090109 enh59618 41010293 75536
Skin (Keratinocyte)
Transcript facotrs that regulate TSPO2[ENSG00000112212.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 41008295 41008759 JUND UCSC Txn Factor no Conserved 41010293 1534 108540159
chr6 41008309 41008676 FOSL2 UCSC Txn Factor no Conserved 41010293 1617 108540160
chr6 41008420 41008432 HNF1B JASPAR yes 41010293 1861 70361521
chr6 41008433 41008448 HNF4A JASPAR yes 41010293 1845 70361522
chr6 41008434 41008448 NR2F1 JASPAR yes 41010293 1845 70361523
chr6 41008434 41008449 HNF4G JASPAR yes 41010293 1844 70361524
chr6 41008439 41008449 NFIA JASPAR yes 41010293 1844 70361525
chr6 41008441 41008447 NFIC JASPAR yes 41010293 1846 70361526
chr6 41008448 41008468 ESR1 JASPAR yes 41010293 1825 70361527
chr6 41008450 41008470 PPARG JASPAR yes 41010293 1823 70361528
chr6 41008451 41008469 ESR2 JASPAR yes 41010293 1824 70361529
chr6 41008453 41008468 ESR2 JASPAR yes 41010293 1825 70361530
chr6 41008456 41008471 PRDM1 JASPAR yes 41010293 1822 70361531
chr6 41008458 41008479 ZNF263 JASPAR yes 41010293 1814 70361532
chr6 41008460 41008470 MZF1 JASPAR yes 41010293 1823 70361533
chr6 41008478 41008484 SP1 TRANSFAC yes 41010293 1809 70361534
chr6 41008479 41008484 SP1 TRANSFAC yes 41010293 1809 70361535
chr6 41008500 41008515 STAT1 JASPAR yes 41010293 1778 70361536
chr6 41008502 41008513 STAT1 JASPAR yes 41010293 1780 70361537
chr6 41008502 41008513 STAT3 JASPAR yes 41010293 1780 70361538
chr6 41008502 41008515 ELF1 JASPAR yes 41010293 1778 70361539
chr6 41008505 41008512 ETS1 TRANSFAC yes 41010293 1781 70361540
chr6 41008505 41008516 ELK4 JASPAR yes 41010293 1777 70361541
chr6 41008505 41008516 FLI1 JASPAR yes 41010293 1777 70361542
chr6 41008518 41008522 ESR1 TRANSFAC yes 41010293 1771 70361543
chr6 41008532 41008553 ZNF263 JASPAR yes 41010293 1740 70361544
chr6 41008535 41008541 MZF1 JASPAR yes 41010293 1752 70361545
chr6 41008536 41008546 SP1 JASPAR yes 41010293 1747 70361546
chr6 41008553 41008565 PKNOX1 JASPAR yes 41010293 1728 70361547
chr6 41008553 41008565 PKNOX2 JASPAR yes 41010293 1728 70361548
chr6 41008553 41008565 TGIF2 JASPAR yes 41010293 1728 70361549
chr6 41008570 41008581 FOS JASPAR yes 41010293 1712 70361550
chr6 41008570 41008581 FOSL1 JASPAR yes 41010293 1712 70361551
chr6 41008570 41008581 JUND JASPAR yes 41010293 1712 70361552
chr6 41008571 41008580 JDP2 JASPAR yes 41010293 1713 70361553
chr6 41008571 41008582 FOSL2 JASPAR yes 41010293 1711 70361554
chr6 41008571 41008582 JUNB JASPAR yes 41010293 1711 70361555
chr6 41008571 41008585 JUN JASPAR yes 41010293 1708 70361556
chr6 41008572 41008583 BATF JASPAR yes 41010293 1710 70361557
chr6 41008573 41008584 CDX2 JASPAR yes 41010293 1709 70361558
chr6 41008574 41008585 HOXC11 JASPAR yes 41010293 1708 70361559
chr6 41008574 41008585 HOXC12 JASPAR yes 41010293 1708 70361560
chr6 41008575 41008584 CDX1 JASPAR yes 41010293 1709 70361561
chr6 41008575 41008585 HOXC10 JASPAR yes 41010293 1708 70361562
chr6 41008575 41008585 HOXD11 JASPAR yes 41010293 1708 70361563
SNPs associated with TSPO2[ENSG00000112212.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 40863758 rs113390685 T C 146535 Esophagus 0.191255 9022052
chr6 41673646 rs12525948 G A 661570 Heart 0.2487 9027226
chr6 41286058 rs145799064 T C 273982 Breast 0.170389 9024304
chr6 41227746 rs4304154 C A 215670 Ovary 0.392168 9024050
chr6 41594374 rs10223651 A T 582298 Uterus 0.417325 9026823
chr6 41440734 rs73425081 A G 428658 Stomach 0.10134 9025484
Details of TSPO2[ENSG00000112212.7]
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Genomic Location chr6:41010293-41012076[+]
TSS 41010293
Gene Name TSPO2
Ensembl ID ENSG00000112212.7
ENTREZID 222642
Uniprot
Q5TGU0
Protein Name
Translocator protein 2
Expression levels of TSPO2[ENSG00000112212.7]
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