EnhancerDB
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Enhancers that regulate TFEB[ENSG00000112561.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 41608113 41608435 vista51923 41703997 95562
VISTA
chr6 41609085 41613535 enh77877 41703997 90462
Muscle (A673)
chr6 41612844 41613289 vista51924 41703997 90708
VISTA
chr6 41623844 41623904 vista51925 41703997 80093
VISTA
chr6 41641145 41645381 enh46124 41703997 58616
Muscle (Myotube)
chr6 41649853 41650127 vista51926 41703997 53870
VISTA
chr6 41659265 41671255 enh23243 41703997 32742
Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Lung (PC-9) Muscle (Myoblast) Heart
chr6 41661673 41661892 vista51927 41703997 42105
VISTA
chr6 41672005 41699742 enh9103 41703997 4255
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 41672440 41672821 vista51928 41703997 31176
VISTA
chr6 41674655 41674829 vista51929 41703997 29168
VISTA
chr6 41675584 41675662 vista51930 41703997 28335
VISTA
chr6 41686086 41686432 vista51931 41703997 17565
VISTA
chr6 41696174 41696539 vista51932 41703997 7458
VISTA
chr6 41698347 41698506 vista51933 41703997 5491
VISTA
chr6 41725185 41737455 enh9104 41703997 21188
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Lung Stomach Placenta Blood (Karpas-422) Pancreas Uterus Heart
chr6 41780485 41788615 enh9105 41703997 76488
Bone Marrow (K562) Muscle (A673) Thymus Blood (Karpas-422)
chr6 41790965 41795155 enh84160 41703997 86968
Prostate (PC-3) Lung (PC-9) Epithelial (MCF-7)
chr6 41801845 41807755 enh9106 41703997 97848
Peripheral Blood (MM.1S) Blood (Karpas-422)
Transcript facotrs that regulate TFEB[ENSG00000112561.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 41699000 41699010 NKX2-3 JASPAR yes 41703997 4987 101670417
chr6 41699001 41699009 ISL2 JASPAR yes 41703997 4988 101670418
chr6 41699001 41699010 NKX3-2 JASPAR yes 41703997 4987 101670419
chr6 41699019 41699034 RUNX2 JASPAR yes 41703997 4963 101670420
chr6 41699056 41699075 REST JASPAR yes 41703997 4922 101670421
chr6 41699058 41699070 INSM1 JASPAR yes 41703997 4927 101670422
chr6 41699065 41699085 ESR1 JASPAR yes 41703997 4912 101670423
chr6 41699067 41699078 USF1 JASPAR yes 41703997 4919 101670424
chr6 41699067 41699078 USF2 JASPAR yes 41703997 4919 101670425
chr6 41699068 41699086 ESR1 JASPAR yes 41703997 4911 101670426
chr6 41699070 41699085 ESR2 JASPAR yes 41703997 4912 101670427
chr6 41699080 41699084 H4TF2 TRANSFAC yes 41703997 4913 101670428
chr6 41699090 41699102 MEF2B JASPAR yes 41703997 4895 101670429
chr6 41699110 41699114 NFE TRANSFAC yes 41703997 4883 101670430
chr6 41699122 41699135 ELF3 JASPAR yes 41703997 4862 101670431
chr6 41699123 41699133 ETV6 JASPAR yes 41703997 4864 101670432
chr6 41699123 41699134 ELF5 JASPAR yes 41703997 4863 101670433
chr6 41699123 41699134 SPDEF JASPAR yes 41703997 4863 101670434
chr6 41699123 41699135 EHF JASPAR yes 41703997 4862 101670435
chr6 41699123 41699135 ELF1 JASPAR yes 41703997 4862 101670436
chr6 41699123 41699135 ELF4 JASPAR yes 41703997 4862 101670437
chr6 41699123 41699136 ELF1 JASPAR yes 41703997 4861 101670438
chr6 41699124 41699131 SPI1 JASPAR yes 41703997 4866 101670439
chr6 41699124 41699132 EHF JASPAR yes 41703997 4865 101670440
chr6 41699124 41699132 FEV JASPAR yes 41703997 4865 101670441
chr6 41699187 41699207 RREB1 JASPAR yes 41703997 4790 101670442
chr6 41699192 41699212 RREB1 JASPAR yes 41703997 4785 101670443
chr6 41699194 41699214 RREB1 JASPAR yes 41703997 4783 101670444
chr6 41699196 41699216 RREB1 JASPAR yes 41703997 4781 101670445
chr6 41699197 41699217 RREB1 JASPAR yes 41703997 4780 101670446
chr6 41699201 41699204 MYB TRANSFAC yes 41703997 4793 101670447
chr6 41699201 41699221 RREB1 JASPAR yes 41703997 4776 101670448
chr6 41699204 41699224 RREB1 JASPAR yes 41703997 4773 101670449
chr6 41699205 41699225 RREB1 JASPAR yes 41703997 4772 101670450
chr6 41699206 41699216 SP1 JASPAR yes 41703997 4781 101670451
chr6 41699208 41699218 ZNF740 JASPAR yes 41703997 4779 101670452
chr6 41699210 41699231 ZNF263 JASPAR yes 41703997 4766 101670453
chr6 41699217 41699238 ZNF263 JASPAR yes 41703997 4759 101670454
chr6 41699220 41699241 ZNF263 JASPAR yes 41703997 4756 101670455
chr6 41699222 41699243 IRF1 JASPAR yes 41703997 4754 101670456
chr6 41699224 41699239 PRDM1 JASPAR yes 41703997 4758 101670457
chr6 41699224 41699239 STAT2 JASPAR yes 41703997 4758 101670458
chr6 41699225 41699239 STAT1 JASPAR yes 41703997 4758 101670459
chr6 41699226 41699247 ZNF263 JASPAR yes 41703997 4750 101670460
chr6 41699227 41699248 ZNF263 JASPAR yes 41703997 4749 101670461
chr6 41699228 41699249 IRF1 JASPAR yes 41703997 4748 101670462
chr6 41699229 41699250 ZNF263 JASPAR yes 41703997 4747 101670463
chr6 41699230 41699245 STAT2 JASPAR yes 41703997 4752 101670464
chr6 41699230 41699251 ZNF263 JASPAR yes 41703997 4746 101670465
chr6 41699231 41699241 GABPA JASPAR yes 41703997 4756 101670466
chr6 41699231 41699244 ELF1 JASPAR yes 41703997 4753 101670467
chr6 41699231 41699245 SPI1 JASPAR yes 41703997 4752 101670468
chr6 41699231 41699245 SPIC JASPAR yes 41703997 4752 101670469
chr6 41699232 41699253 IRF1 JASPAR yes 41703997 4744 101670470
chr6 41699233 41699254 ZNF263 JASPAR yes 41703997 4743 101670471
chr6 41699234 41699239 ETS2 TRANSFAC yes 41703997 4758 101670472
chr6 41699234 41699249 PRDM1 JASPAR yes 41703997 4748 101670473
chr6 41699260 41699266 NFIC JASPAR yes 41703997 4731 101670474
chr6 41699270 41699285 HSF1 JASPAR yes 41703997 4712 101670475
chr6 41699271 41699284 HSF1 JASPAR yes 41703997 4713 101670476
chr6 41699271 41699284 HSF2 JASPAR yes 41703997 4713 101670477
chr6 41699271 41699284 HSF4 JASPAR yes 41703997 4713 101670478
chr6 41699278 41699292 IRF7 JASPAR yes 41703997 4705 101670479
chr6 41699283 41699300 BCL6B JASPAR yes 41703997 4697 101670480
chr6 41699285 41699299 E2F7 JASPAR yes 41703997 4698 101670481
chr6 41699286 41699298 E2F8 JASPAR yes 41703997 4699 101670482
chr6 41699291 41699302 NFKB1 JASPAR yes 41703997 4695 101670483
chr6 41699292 41699302 RELA JASPAR yes 41703997 4695 101670484
chr6 41699313 41699331 SRF JASPAR yes 41703997 4666 101670485
chr6 41699320 41699334 STAT1 JASPAR yes 41703997 4663 101670486
chr6 41699320 41699335 STAT2 JASPAR yes 41703997 4662 101670487
chr6 41699323 41699333 NFATC3 JASPAR yes 41703997 4664 101670488
chr6 41699341 41699347 SOX10 JASPAR yes 41703997 4650 101670489
chr6 41699354 41699369 RFX5 JASPAR yes 41703997 4628 101670490
chr6 41699358 41699373 RUNX2 JASPAR yes 41703997 4624 101670491
chr6 41699377 41699391 PLAG1 JASPAR yes 41703997 4606 101670492
chr6 41699380 41699396 GLIS1 JASPAR yes 41703997 4601 101670493
chr6 41699381 41699395 ZIC1 JASPAR yes 41703997 4602 101670494
chr6 41699383 41699395 GLI2 JASPAR yes 41703997 4602 101670495
chr6 41699399 41699418 PAX5 JASPAR yes 41703997 4579 101670496
chr6 41699404 41699408 H4TF2 TRANSFAC yes 41703997 4589 101670497
chr6 41699440 41699450 SREBF1 JASPAR yes 41703997 4547 101670498
chr6 41699445 41699449 H1TF2 TRANSFAC yes 41703997 4548 101670499
chr6 41699445 41699449 NFE TRANSFAC yes 41703997 4548 101670500
chr6 41699445 41699449 SRF TRANSFAC yes 41703997 4548 101670501
chr6 41699448 41699456 RHOXF1 JASPAR yes 41703997 4541 101670502
chr6 41699452 41699458 MZF1 JASPAR yes 41703997 4539 101670503
chr6 41699520 41699532 TEAD1 JASPAR yes 41703997 4465 101670504
chr6 41699522 41699532 TEAD1 JASPAR yes 41703997 4465 101670505
chr6 41699522 41699532 TEAD4 JASPAR yes 41703997 4465 101670506
chr6 41699523 41699531 TEAD3 JASPAR yes 41703997 4466 101670507
chr6 41699532 41699546 TLX1 JASPAR yes 41703997 4451 101670508
chr6 41699536 41699542 SOX10 JASPAR yes 41703997 4455 101670509
chr6 41699544 41699548 LFA1 TRANSFAC yes 41703997 4449 101670510
chr6 41699557 41699563 YY1 JASPAR yes 41703997 4434 101670511
chr6 41699580 41699588 EHF JASPAR yes 41703997 4409 101670512
chr6 41699590 41699602 INSM1 JASPAR yes 41703997 4395 101670513
chr6 41699609 41699622 ELF1 JASPAR yes 41703997 4375 101670514
chr6 41699610 41699622 ELF1 JASPAR yes 41703997 4375 101670515
chr6 41699610 41699622 ELF4 JASPAR yes 41703997 4375 101670516
chr6 41699612 41699619 ETS1 TRANSFAC yes 41703997 4378 101670517
chr6 41699613 41699621 EHF JASPAR yes 41703997 4376 101670518
chr6 41699613 41699621 FEV JASPAR yes 41703997 4376 101670519
chr6 41699614 41699621 SPI1 JASPAR yes 41703997 4376 101670520
chr6 41699617 41699631 PAX6 JASPAR yes 41703997 4366 101670521
chr6 41699618 41699638 TP63 JASPAR yes 41703997 4359 101670522
chr6 41699619 41699637 TP53 JASPAR yes 41703997 4360 101670523
chr6 41699621 41699636 TP53 JASPAR yes 41703997 4361 101670524
chr6 41699645 41699665 TP63 JASPAR yes 41703997 4332 101670525
chr6 41699646 41699664 TP73 JASPAR yes 41703997 4333 101670526
chr6 41699673 41699677 H4TF2 TRANSFAC yes 41703997 4320 101670527
chr6 41699681 41699685 ESR1 TRANSFAC yes 41703997 4312 101670528
chr6 41699688 41699699 GCM1 JASPAR yes 41703997 4298 101670529
chr6 41699690 41699699 THAP1 JASPAR yes 41703997 4298 101670530
chr6 41699720 41699729 ZEB1 JASPAR yes 41703997 4268 101670531
SNPs associated with TFEB[ENSG00000112561.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 41702227 rs13198178 G C 0 Esophagus 1.63042e-05 9027622
chr6 41672769 rs6933790 T C 0 Esophagus 0.0178432 9027217
chr6 42130039 rs34136008 CT C 426042 Heart 0.307395 9030445
chr6 41681036 rs34880700 G A,C 0 Pancreas 0.204675 9027314
chr6 42361723 rs182267091 G A 657726 Breast 0.0152744 9032532
chr6 42473433 rs77727673 A G 769436 Spleen 0.19269 9033218
chr6 41666065 rs6916515 G A 0 Uterus 0.225487 9027139
chr6 42377960 rs114450276 T C 673963 Liver 0.0551647 9032705
chr6 41687252 rs28360641 G C 0 Lung 0.129351 9027430
chr6 41561180 rs9357364 G A 90536 Adrenal 0.228006 9026624
Details of TFEB[ENSG00000112561.13]
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Genomic Location chr6:41651716-41703997[-]
TSS 41703997
Gene Name TFEB
Ensembl ID ENSG00000112561.13
ENTREZID 7942
Uniprot
A0A024RCY3
P19484
B0QYS6
Protein Name
isoform CRA_b
TFEB transcription factor
Transcription factor EB
Transcription factor EB
Expression levels of TFEB[ENSG00000112561.13]
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