EnhancerDB
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Enhancers that regulate TRIM62[ENSG00000116525.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 33550045 33556375 enh107376 33647660 91285
Blood (T-cell)
chr1 33558613 33562979 enh89477 33647660 84681
Bone (Osteoblast) Prostate (RWPE1)
chr1 33564918 33565286 vista1146 33647660 82374
VISTA
chr1 33590205 33598323 enh218 33647660 49337
Cervix (HeLa-S3) Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Uterus
chr1 33593963 33594340 vista1147 33647660 53320
VISTA
chr1 33596124 33596280 vista1148 33647660 51380
VISTA
chr1 33603782 33610935 enh64017 33647660 36725
Neural Stem Cells (H9) Brain (SK-N-SH) Heart
chr1 33611625 33622108 enh11731 33647660 25552
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr1 33622437 33622835 vista1149 33647660 24825
VISTA
chr1 33627245 33641235 enh219 33647660 6425
Brain (SK-N-SH) Bone (Osteoblast) Placenta Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
chr1 33645848 33646140 vista1150 33647660 1520
VISTA
chr1 33682385 33690299 enh11732 33647660 34725
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Placenta Colon (HCT116) Lung (PC-9) Heart
chr1 33685276 33685676 vista1151 33647660 37616
VISTA
chr1 33692744 33705455 enh11733 33647660 45084
Liver (HepG2) Prostate (RWPE1) Blood (GM12878) Muscle (A673) Placenta Lung (PC-9) Heart
chr1 33706425 33712935 enh11734 33647660 58765
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Placenta Uterus Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 33716636 33716974 vista1152 33647660 68976
VISTA
chr1 33722494 33723960 vista23 33647660 74834
VISTA
chr1 33724185 33729262 enh47159 33647660 76525
Bone (Osteoblast) Thymus
chr1 33731145 33735359 enh220 33647660 83485
Esophagus Prostate (RWPE1) Blood (Karpas-422)
Transcript facotrs that regulate TRIM62[ENSG00000116525.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 33645849 33645855 SP1 TRANSFAC yes 33647660 1805 118269938
chr1 33645861 33645867 JUN TRANSFAC yes 33647660 1793 118269939
chr1 33645922 33646162 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 33647660 1498 107802802
chr1 33645966 33645971 GATA2 JASPAR yes 33647660 1689 118269940
chr1 33645988 33645991 MYB TRANSFAC yes 33647660 1669 118269941
chr1 33646003 33646010 E2F1 TRANSFAC yes 33647660 1650 118269942
chr1 33646010 33646013 MYB TRANSFAC yes 33647660 1647 118269943
chr1 33646026 33646047 MAFG JASPAR yes 33647660 1613 118269944
chr1 33646031 33646049 MAFF JASPAR yes 33647660 1611 118269945
chr1 33646032 33646047 MAFK JASPAR yes 33647660 1613 118269946
chr1 33646036 33646047 NRL JASPAR yes 33647660 1613 118269947
chr1 33646038 33646053 HNF4A JASPAR yes 33647660 1607 118269948
chr1 33646039 33646054 HNF4G JASPAR yes 33647660 1606 118269949
chr1 33646043 33646053 NFIA JASPAR yes 33647660 1607 118269950
chr1 33646044 33646053 NFIX JASPAR yes 33647660 1607 118269951
chr1 33646045 33646051 NFIC JASPAR yes 33647660 1609 118269952
chr1 33646054 33646057 MYB TRANSFAC yes 33647660 1603 118269953
chr1 33646082 33646091 ZEB1 JASPAR yes 33647660 1569 118269954
chr1 33646085 33646090 USF2 TRANSFAC yes 33647660 1570 118269955
chr1 33646088 33646092 NFE TRANSFAC yes 33647660 1568 118269956
chr1 33646089 33646104 HSF1 JASPAR yes 33647660 1556 118269957
chr1 33646090 33646103 HSF1 JASPAR yes 33647660 1557 118269958
chr1 33646090 33646103 HSF2 JASPAR yes 33647660 1557 118269959
chr1 33646090 33646103 HSF4 JASPAR yes 33647660 1557 118269960
chr1 33646096 33646106 TEAD4 JASPAR yes 33647660 1554 118269961
chr1 33646096 33646108 TEAD1 JASPAR yes 33647660 1552 118269962
chr1 33646106 33646120 PLAG1 JASPAR yes 33647660 1540 118269963
SNPs associated with TRIM62[ENSG00000116525.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 33182684 rs373012957 CTTTG C 428319 Heart 0.514769 219522
chr1 32786317 rs184617846 G A 824686 Breast 0.271161 217850
chr1 32803782 rs77475843 A G 807221 Uterus 0.181983 217945
chr1 33352433 rs72654052 G T 258570 Adrenal 0.425867 220530
Details of TRIM62[ENSG00000116525.9]
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Genomic Location chr1:33611003-33647660[-]
TSS 33647660
Gene Name TRIM62
Ensembl ID ENSG00000116525.9
ENTREZID 55223
Uniprot
Q9BVG3
Protein Name
E3 ubiquitin-protein ligase TRIM62
Expression levels of TRIM62[ENSG00000116525.9]
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