EnhancerDB
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Enhancers that regulate CD46[ENSG00000117335.14]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 207821445 207825595 enh90761 207925402 99807
Bone Marrow (K562)
chr1 207843965 207848115 enh103195 207925402 77287
Peripheral Blood (MM.1S)
chr1 207852005 207856310 enh90762 207925402 69092
Bone Marrow (K562)
chr1 207863305 207867455 enh90763 207925402 57947
Bone Marrow (K562)
chr1 207878805 207883655 enh110672 207925402 41747
Cervix (HeLa-S3)
chr1 207884145 207888495 enh110673 207925402 36907
Cervix (HeLa-S3)
chr1 207908985 207916175 enh110674 207925402 9227
Cervix (HeLa-S3)
chr1 207921430 207921703 vista4840 207925402 3699
VISTA
chr1 207947425 207951575 enh87677 207925402 22023
Pancreas
chr1 207959185 207966855 enh12604 207925402 33783
Placenta Lung (PC-9)
chr1 207968445 207975895 enh900 207925402 43043
Placenta Blood (T-cell) Blood (Karpas-422) Stomach
chr1 207976785 208007638 enh901 207925402 51383
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr1 207997315 207997832 vista4841 207925402 71913
VISTA
chr1 207998055 207998202 vista4842 207925402 72653
VISTA
chr1 207999163 207999611 vista4843 207925402 73761
VISTA
chr1 208009763 208017635 enh58209 207925402 84361
Skin (Keratinocyte) Ovary Esophagus Adrenal Pancreas Uterus Stomach
chr1 208018475 208028955 enh12605 207925402 93073
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Adrenal Lung (PC-9) Breast Uterus Blood (T-cell) Heart
chr1 208021631 208021781 vista4844 207925402 96229
VISTA
Transcript facotrs that regulate CD46[ENSG00000117335.14]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 207921350 207921686 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 207925402 3716 107864769
chr1 207921437 207921767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 207925402 3635 107864770
chr1 207921445 207921463 NR3C1 JASPAR yes 207925402 3939 118445936
chr1 207921460 207921780 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 207925402 3622 107864771
chr1 207921466 207921484 RARA JASPAR yes 207925402 3918 118445937
chr1 207921477 207921494 RARA JASPAR yes 207925402 3908 118445938
chr1 207921480 207921816 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 207925402 3586 107864772
chr1 207921481 207921496 TP53 JASPAR yes 207925402 3906 118445939
chr1 207921488 207921500 HES5 JASPAR yes 207925402 3902 118445940
chr1 207921488 207921500 HES7 JASPAR yes 207925402 3902 118445941
chr1 207921488 207921500 PKNOX1 JASPAR yes 207925402 3902 118445942
chr1 207921488 207921500 PKNOX2 JASPAR yes 207925402 3902 118445943
chr1 207921488 207921500 TGIF1 JASPAR yes 207925402 3902 118445944
chr1 207921488 207921500 TGIF2 JASPAR yes 207925402 3902 118445945
chr1 207921489 207921500 USF2 JASPAR yes 207925402 3902 118445946
chr1 207921490 207921500 MAX JASPAR yes 207925402 3902 118445947
chr1 207921491 207921867 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 207925402 3535 107864773
chr1 207921492 207921511 RFX2 JASPAR yes 207925402 3891 118445948
chr1 207921494 207921509 RFX5 JASPAR yes 207925402 3893 118445949
chr1 207921501 207921687 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 207925402 3715 107864774
chr1 207921502 207921514 YY1 JASPAR yes 207925402 3888 118445950
chr1 207921506 207921906 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 207925402 3496 107864775
chr1 207921516 207921520 NFE TRANSFAC yes 207925402 3882 118445951
chr1 207921517 207921522 GATA2 JASPAR yes 207925402 3880 118445952
chr1 207921519 207921525 MZF1 JASPAR yes 207925402 3877 118445953
chr1 207921526 207921766 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 207925402 3636 107864776
chr1 207921549 207921562 POU2F2 JASPAR yes 207925402 3840 118445954
chr1 207921549 207921563 POU1F1 JASPAR yes 207925402 3839 118445955
chr1 207921550 207921562 POU3F1 JASPAR yes 207925402 3840 118445956
chr1 207921550 207921562 POU3F2 JASPAR yes 207925402 3840 118445957
chr1 207921550 207921563 POU3F3 JASPAR yes 207925402 3839 118445958
chr1 207921551 207921555 YY1 TRANSFAC yes 207925402 3847 118445959
chr1 207921551 207921563 POU2F1 JASPAR yes 207925402 3839 118445960
chr1 207921552 207921559 POU2F1 TRANSFAC yes 207925402 3843 118445961
chr1 207921552 207921559 POU2F2C TRANSFAC yes 207925402 3843 118445962
chr1 207921552 207921559 POU2F2 TRANSFAC yes 207925402 3843 118445963
chr1 207921552 207921560 POU2F1 TRANSFAC yes 207925402 3842 118445964
chr1 207921552 207921561 POU3F4 JASPAR yes 207925402 3841 118445965
chr1 207921552 207921561 POU5F1B JASPAR yes 207925402 3841 118445966
chr1 207921557 207921569 MEF2A JASPAR yes 207925402 3833 118445967
chr1 207921557 207921569 MEF2B JASPAR yes 207925402 3833 118445968
chr1 207921557 207921569 MEF2D JASPAR yes 207925402 3833 118445969
chr1 207921558 207921568 MEF2A JASPAR yes 207925402 3834 118445970
chr1 207921575 207921945 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 207925402 3457 107864777
chr1 207921625 207921629 H1TF2 TRANSFAC yes 207925402 3773 118445971
chr1 207921625 207921629 NFE TRANSFAC yes 207925402 3773 118445972
chr1 207921625 207921629 SRF TRANSFAC yes 207925402 3773 118445973
chr1 207921639 207921651 POU2F1 JASPAR yes 207925402 3751 118445974
chr1 207921639 207921653 POU1F1 JASPAR yes 207925402 3749 118445975
chr1 207921640 207921652 POU3F1 JASPAR yes 207925402 3750 118445976
chr1 207921640 207921652 POU3F2 JASPAR yes 207925402 3750 118445977
chr1 207921640 207921653 POU2F2 JASPAR yes 207925402 3749 118445978
chr1 207921641 207921649 POU2F1 TRANSFAC yes 207925402 3753 118445979
chr1 207921641 207921650 POU3F4 JASPAR yes 207925402 3752 118445980
chr1 207921641 207921650 POU5F1B JASPAR yes 207925402 3752 118445981
chr1 207921642 207921649 POU2F1 TRANSFAC yes 207925402 3753 118445982
chr1 207921642 207921649 POU2F2 TRANSFAC yes 207925402 3753 118445983
chr1 207921671 207921679 FOXL1 JASPAR yes 207925402 3723 118445984
chr1 207921691 207921697 NFE2 TRANSFAC yes 207925402 3705 118445985
SNPs associated with CD46[ENSG00000117335.14], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 207960104 rs6657476 G T 0 Esophagus 7.15236e-31 896070
chr1 207912179 rs7550273 G C 13223 Esophagus 5.93423e-07 895873
chr1 207960104 rs6657476 G T 0 Heart 3.93898e-12 896070
chr1 207993699 rs2724398 A G 24841 Pancreas 0.0668327 896401
chr1 208416557 rs183937662 G T 447699 Ovary 0.0380246 899880
chr1 207912179 rs7550273 G C 13223 Liver 0.00177609 895873
chr1 208044213 rs2724376 T C 75355 Lung 0.233395 896938
Details of CD46[ENSG00000117335.14]
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Genomic Location chr1:207925402-207968858[+]
TSS 207925402
Gene Name CD46
Ensembl ID ENSG00000117335.14
ENTREZID 4179
Uniprot
P15529
Protein Name
Complement system membrane cofactor protein CD46
Membrane cofactor protein
Expression levels of CD46[ENSG00000117335.14]
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