EnhancerDB
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Enhancers that regulate KLHL29[ENSG00000119771.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 23506069 23519084 enh44732 23608088 89004
Prostate (RWPE1) Esophagus Lung Stomach Muscle (A673) Uterus Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
chr2 23524857 23525048 vista30671 23608088 83040
VISTA
chr2 23525558 23525779 vista30672 23608088 82309
VISTA
chr2 23543845 23550575 enh99613 23608088 57513
Uterus Brain (SK-N-MC)
chr2 23570904 23577335 enh44733 23608088 30753
Brain (SK-N-SH) Ovary Large Intestine Bone (Osteoblast) Pancreas Muscle (Myotube) Uterus Stomach
chr2 23580825 23591855 enh44734 23608088 16233
Pancreas Muscle (A673) Muscle (Myotube) Liver (HepG2)
chr2 23596445 23602875 enh86341 23608088 5213
Bone Marrow (K562) Colon (HCT116) Cervix (HeLa-S3) Lung (PC-9)
chr2 23609943 23610311 vista30673 23608088 1855
VISTA
chr2 23622168 23629774 enh5348 23608088 14080
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Uterus Blood (Karpas-422) Pancreas (Panc1) Neural Stem Cells (H9) Stomach
chr2 23631132 23631189 vista30674 23608088 23044
VISTA
chr2 23632492 23662135 enh18338 23608088 24404
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
chr2 23643689 23643801 vista30675 23608088 35601
VISTA
chr2 23670168 23678955 enh48234 23608088 62080
Blood (GM12878) Stomach Muscle (A673) Spleen Uterus Thymus Heart
chr2 23681745 23685895 enh112639 23608088 73657
Brain (SK-N-MC)
chr2 23681941 23682000 vista30676 23608088 73853
VISTA
chr2 23699365 23712815 enh18339 23608088 91277
Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript facotrs that regulate KLHL29[ENSG00000119771.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 23609951 23609962 E2F6 JASPAR yes 23608088 1863 22017395
chr2 23609952 23609973 ZNF263 JASPAR yes 23608088 1864 22017396
chr2 23609955 23609966 E2F6 JASPAR yes 23608088 1867 22017397
chr2 23609983 23609994 TFAP2A JASPAR yes 23608088 1895 22017398
chr2 23609983 23609994 TFAP2B JASPAR yes 23608088 1895 22017399
chr2 23609983 23609994 TFAP2C JASPAR yes 23608088 1895 22017400
chr2 23609984 23609993 TFAP2A JASPAR yes 23608088 1896 22017401
chr2 23610006 23610018 FOXI1 JASPAR yes 23608088 1918 22017402
chr2 23610009 23610013 YY1 TRANSFAC yes 23608088 1921 22017403
chr2 23610012 23610023 NFIL3 JASPAR yes 23608088 1924 22017404
chr2 23610020 23610024 YY1 TRANSFAC yes 23608088 1932 22017405
chr2 23610193 23610197 NFE TRANSFAC yes 23608088 2105 22017406
chr2 23610197 23610207 HMBOX1 JASPAR yes 23608088 2109 22017407
chr2 23610211 23610215 YY1 TRANSFAC yes 23608088 2123 22017408
chr2 23610217 23610238 IRF1 JASPAR yes 23608088 2129 22017409
chr2 23610219 23610234 STAT2 JASPAR yes 23608088 2131 22017410
chr2 23610220 23610234 STAT1 JASPAR yes 23608088 2132 22017411
chr2 23610221 23610235 IRF8 JASPAR yes 23608088 2133 22017412
chr2 23610221 23610236 IRF9 JASPAR yes 23608088 2133 22017413
chr2 23610244 23610248 NFE TRANSFAC yes 23608088 2156 22017414
chr2 23610245 23610255 SMAD3 JASPAR yes 23608088 2157 22017415
chr2 23610271 23610286 RUNX2 JASPAR yes 23608088 2183 22017416
chr2 23610274 23610286 GLI2 JASPAR yes 23608088 2186 22017417
chr2 23610278 23610292 GATA2 JASPAR yes 23608088 2190 22017418
chr2 23610282 23610290 GATA5 JASPAR yes 23608088 2194 22017419
chr2 23610291 23610294 MYB TRANSFAC yes 23608088 2203 22017420
chr2 23610303 23610309 MAZ TRANSFAC yes 23608088 2215 22017421
SNPs associated with KLHL29[ENSG00000119771.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 23787267 rs1864806 G A 0 Esophagus 0.0165354 5585339
chr2 23745165 rs5016716 G A 0 Heart 0.170957 5584991
chr2 23771966 rs72793575 G A,T 0 Heart 0.375928 5585152
chr2 23722541 rs1653759 A G 0 Pancreas 5.72206e-08 5584667
chr2 23245172 rs183866596 C G 362916 Breast 0.320422 5581912
chr2 23700036 rs58192135 G A 0 Uterus 0.0265159 5584335
chr2 23572070 rs56388950 G C 36018 Stomach 0.311146 5583279
Details of KLHL29[ENSG00000119771.10]
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Genomic Location chr2:23608088-23931481[+]
TSS 23608088
Gene Name KLHL29
Ensembl ID ENSG00000119771.10
ENTREZID 114818
Uniprot
Q96CT2
Protein Name
KLHL29 protein
Kelch-like protein 29
Expression levels of KLHL29[ENSG00000119771.10]
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