EnhancerDB
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Enhancers that regulate TBX4[ENSG00000121075.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 59426505 59433199 enh62636 59529765 96566
Esophagus Epithelial (MCF-7)
chr17 59434096 59434461 vista25405 59529765 95304
VISTA
chr17 59435665 59445155 enh89873 59529765 84610
Liver (HepG2) Bone (Osteoblast) Prostate (RWPE1) Epithelial (MCF-7)
chr17 59449966 59450070 vista25406 59529765 79695
VISTA
chr17 59458042 59468254 enh99437 59529765 61511
Uterus Bone (Osteoblast)
chr17 59473194 59473360 vista25407 59529765 56405
VISTA
chr17 59473431 59474098 vista25408 59529765 55667
VISTA
chr17 59474585 59474918 vista25409 59529765 54847
VISTA
chr17 59488217 59488528 vista25410 59529765 41237
VISTA
chr17 59488945 59496630 enh17270 59529765 33135
Brain (SK-N-SH) Prostate (RWPE1) Esophagus Placenta Uterus Stomach
chr17 59491856 59491969 vista25411 59529765 37796
VISTA
chr17 59501296 59508895 enh52545 59529765 20870
Prostate (PC-3) Liver (HepG2) Large Intestine Colon (HCT116) Lung (PC-9)
chr17 59518225 59524435 enh52546 59529765 5330
Prostate (PC-3) Large Intestine
chr17 59532462 59532698 vista25412 59529765 2697
VISTA
chr17 59534565 59541175 enh17271 59529765 4800
Placenta Liver (HepG2) Large Intestine
chr17 59545885 59555379 enh52547 59529765 16120
Esophagus Prostate (PC-3) Large Intestine
chr17 59564765 59575175 enh32254 59529765 35000
Liver (HepG2) Prostate (RWPE1) Large Intestine Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myotube)
chr17 59579913 59584457 enh116187 59529765 50148
Pancreas (Panc1)
chr17 59586825 59590975 enh112513 59529765 57060
Brain (SK-N-MC)
chr17 59590842 59590861 vista25413 59529765 61077
VISTA
chr17 59592705 59599235 enh112514 59529765 62940
Brain (SK-N-MC)
chr17 59629394 59637306 enh60679 59529765 99629
Brain (SK-N-SH) Blood (OCI-LY7) Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
Transcript facotrs that regulate TBX4[ENSG00000121075.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 59531155 59535765 EZH2 UCSC Txn Factor no Conserved 59529765 1390 108279505
chr17 59531155 59535765 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 59529765 1390 108279506
chr17 59531868 59532608 TCF7L2 GTRD no Colon (HCT116) 59529765 2103 108279507
chr17 59531976 59532760 ZNF143 GTRD no Epithelial (MCF-7) 59529765 2211 108279508
chr17 59531984 59532698 TCF7L2 GTRD no Colon (HCT116) 59529765 2219 108279509
chr17 59532014 59532523 TCF7L2 GTRD no Colon (HCT116) 59529765 2249 108279510
chr17 59532020 59532631 ZNF143 GTRD no Epithelial (MCF-7) 59529765 2255 108279511
chr17 59532021 59532613 ZNF143 GTRD no Epithelial (MCF-7) 59529765 2256 108279512
chr17 59532032 59532654 ZNF143 GTRD no Epithelial (MCF-7) 59529765 2267 108279513
chr17 59532246 59532862 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2481 108279514
chr17 59532292 59532692 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2527 108279515
chr17 59532299 59532843 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2534 108279516
chr17 59532357 59532693 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2592 108279517
chr17 59532380 59532680 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2615 108279518
chr17 59532406 59532776 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2641 108279519
chr17 59532408 59532784 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2643 108279520
chr17 59532408 59533008 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 59529765 2643 108279521
chr17 59532410 59532634 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2645 108279522
chr17 59532412 59532690 FOXA1 UCSC Txn Factor no Conserved 59529765 2647 108279523
chr17 59532413 59532684 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2648 108279524
chr17 59532432 59532669 FOXA2 UCSC Txn Factor no Conserved 59529765 2667 108279525
chr17 59532432 59532669 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2667 108279526
chr17 59532442 59532662 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2677 108279527
chr17 59532465 59532621 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2700 108279528
chr17 59532466 59532470 H4TF2 TRANSFAC yes 59529765 2701 21268892
chr17 59532466 59532574 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2701 108279529
chr17 59532472 59532480 MEIS2 JASPAR yes 59529765 2707 21268893
chr17 59532472 59532480 MEIS3 JASPAR yes 59529765 2707 21268894
chr17 59532473 59532477 NFE TRANSFAC yes 59529765 2708 21268895
chr17 59532473 59532480 MEIS1 JASPAR yes 59529765 2708 21268896
chr17 59532476 59532490 GATA2 JASPAR yes 59529765 2711 21268897
chr17 59532480 59532488 GATA3 JASPAR yes 59529765 2715 21268898
chr17 59532480 59532488 GATA5 JASPAR yes 59529765 2715 21268899
chr17 59532485 59532495 HOXA13 JASPAR yes 59529765 2720 21268900
chr17 59532485 59532495 HOXB13 JASPAR yes 59529765 2720 21268901
chr17 59532486 59532497 CDX2 JASPAR yes 59529765 2721 21268902
chr17 59532491 59532502 NFKB1 JASPAR yes 59529765 2726 21268903
chr17 59532491 59532504 NFKB2 JASPAR yes 59529765 2726 21268904
chr17 59532492 59532502 REL JASPAR yes 59529765 2727 21268905
chr17 59532492 59532503 NFKB1 JASPAR yes 59529765 2727 21268906
chr17 59532502 59532624 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 59529765 2737 108279530
chr17 59532515 59532525 SP1 JASPAR yes 59529765 2750 21268907
chr17 59532522 59532536 GATA2 JASPAR yes 59529765 2757 21268908
chr17 59532526 59532534 GATA3 JASPAR yes 59529765 2761 21268909
chr17 59532548 59532563 FOXA1 JASPAR yes 59529765 2783 21268910
chr17 59532549 59532564 FOXP1 JASPAR yes 59529765 2784 21268911
chr17 59532550 59532561 FOXP2 JASPAR yes 59529765 2785 21268912
chr17 59532550 59532562 FOXC2 JASPAR yes 59529765 2785 21268913
chr17 59532550 59532564 FOXF2 JASPAR yes 59529765 2785 21268914
chr17 59532551 59532559 FOXD1 JASPAR yes 59529765 2786 21268915
chr17 59532551 59532559 FOXG1 JASPAR yes 59529765 2786 21268916
chr17 59532551 59532559 FOXO3 JASPAR yes 59529765 2786 21268917
chr17 59532551 59532562 FOXB1 JASPAR yes 59529765 2786 21268918
chr17 59532551 59532562 FOXC1 JASPAR yes 59529765 2786 21268919
chr17 59532552 59532559 FOXD2 JASPAR yes 59529765 2787 21268920
chr17 59532552 59532559 FOXI1 JASPAR yes 59529765 2787 21268921
chr17 59532552 59532559 FOXL1 JASPAR yes 59529765 2787 21268922
chr17 59532552 59532559 FOXO4 JASPAR yes 59529765 2787 21268923
chr17 59532552 59532559 FOXO6 JASPAR yes 59529765 2787 21268924
chr17 59532552 59532559 FOXP3 JASPAR yes 59529765 2787 21268925
chr17 59532552 59532563 FOXA1 JASPAR yes 59529765 2787 21268926
chr17 59532566 59532570 H4TF2 TRANSFAC yes 59529765 2801 21268927
chr17 59532629 59532649 TP53 JASPAR yes 59529765 2864 21268928
chr17 59532637 59532648 NFKB1 JASPAR yes 59529765 2872 21268929
chr17 59532648 59532654 MAZ TRANSFAC yes 59529765 2883 21268930
chr17 59532657 59532678 ZNF263 JASPAR yes 59529765 2892 21268931
chr17 59532659 59532680 ZNF263 JASPAR yes 59529765 2894 21268932
chr17 59532662 59532673 E2F1 JASPAR yes 59529765 2897 21268933
chr17 59532663 59532674 E2F4 JASPAR yes 59529765 2898 21268934
chr17 59532663 59532674 E2F6 JASPAR yes 59529765 2898 21268935
chr17 59532667 59532672 ETS2 TRANSFAC yes 59529765 2902 21268936
chr17 59532668 59532689 ZNF263 JASPAR yes 59529765 2903 21268937
chr17 59532669 59532690 ZNF263 JASPAR yes 59529765 2904 21268938
chr17 59532674 59532695 IRF1 JASPAR yes 59529765 2909 21268939
chr17 59532674 59532984 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 59529765 2909 108279531
chr17 59532678 59532693 PRDM1 JASPAR yes 59529765 2913 21268940
chr17 59532688 59532693 SP1 TRANSFAC yes 59529765 2923 21268941
chr17 59532689 59532694 SP1 TRANSFAC yes 59529765 2924 21268942
chr17 59532689 59532695 SP1 TRANSFAC yes 59529765 2924 21268943
chr17 59532693 59532697 LFA1 TRANSFAC yes 59529765 2928 21268944
chr17 59534565 59534569 NFE TRANSFAC yes 59529765 4800 55157560
chr17 59534575 59534581 NFE2 TRANSFAC yes 59529765 4810 55157561
chr17 59534595 59534601 YY1 JASPAR yes 59529765 4830 55157562
chr17 59534608 59534614 HiNF-A TRANSFAC yes 59529765 4843 55157563
chr17 59534618 59534629 NFE2L2 JASPAR yes 59529765 4853 55157564
chr17 59534640 59534643 MYB TRANSFAC yes 59529765 4875 55157565
chr17 59534696 59534710 SPI1 JASPAR yes 59529765 4931 55157566
chr17 59534697 59534710 ELF1 JASPAR yes 59529765 4932 55157567
chr17 59534698 59534710 EHF JASPAR yes 59529765 4933 55157568
chr17 59534698 59534711 ELF3 JASPAR yes 59529765 4933 55157569
chr17 59534699 59534710 ELF5 JASPAR yes 59529765 4934 55157570
chr17 59534700 59534706 PEA3 TRANSFAC yes 59529765 4935 55157571
chr17 59534700 59534710 ETV6 JASPAR yes 59529765 4935 55157572
chr17 59534701 59534709 EHF JASPAR yes 59529765 4936 55157573
chr17 59534702 59534709 SPI1 JASPAR yes 59529765 4937 55157574
chr17 59534716 59534725 VENTX JASPAR yes 59529765 4951 55157575
chr17 59534722 59534733 PROP1 JASPAR yes 59529765 4957 55157576
chr17 59534742 59534760 NR3C1 JASPAR yes 59529765 4977 55157577
SNPs associated with TBX4[ENSG00000121075.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 59572163 rs11079431 C T 9692 Breast 0.474216 4968935
chr17 59489707 rs77617620 C T 40058 Thyroid 0.246213 4968368
chr17 59572496 rs4968568 A G 10025 Adrenal 0.00125683 4968938
Details of TBX4[ENSG00000121075.5]
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Genomic Location chr17:59529765-59562471[+]
TSS 59529765
Gene Name TBX4
Ensembl ID ENSG00000121075.5
ENTREZID 9496
Uniprot
P57082
Protein Name
T-box transcription factor TBX4
Expression levels of TBX4[ENSG00000121075.5]
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