EnhancerDB
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Enhancers that regulate ZSCAN20[ENSG00000121903.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 33840740 33857476 enh26617 33938246 80770
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Colon (HCT116) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
chr1 33860305 33868235 enh64019 33938246 70011
Bone Marrow (K562) Muscle (A673) Colon (HCT116) Heart
chr1 33873656 33878355 enh26618 33938246 59891
Prostate (PC-3) Astrocyte Bone (Osteoblast) Muscle (Myoblast) Heart Epithelial (MCF-7)
chr1 33880060 33884380 enh85949 33938246 53866
Colon (HCT116)
chr1 33884753 33892495 enh26619 33938246 45751
Astrocyte Prostate (PC-3) Bone (Osteoblast) Muscle (A673)
chr1 33903514 33911735 enh61822 33938246 26511
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Colon (HCT116) Uterus
chr1 33918518 33929175 enh222 33938246 9071
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
chr1 33926622 33926854 vista1157 33938246 11392
VISTA
chr1 33964505 33969675 enh223 33938246 26259
Blood (Karpas-422)
chr1 34027405 34031555 enh109306 33938246 89159
Stomach
Transcript facotrs that regulate ZSCAN20[ENSG00000121903.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with ZSCAN20[ENSG00000121903.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 33936347 rs6425820 C T 1899 Heart 0.0361177 224439
chr1 33352433 rs72654052 G T 585813 Pancreas 0.299467 220530
chr1 33349940 rs72882337 C G 588306 Ovary 0.443172 220510
chr1 33920272 rs4652890 T C 17974 Stomach 0.0436049 224279
Details of ZSCAN20[ENSG00000121903.10]
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Genomic Location chr1:33938246-33962107[+]
TSS 33938246
Gene Name ZSCAN20
Ensembl ID ENSG00000121903.10
ENTREZID 7579
Uniprot
P17040
Protein Name
Zinc finger and SCAN domain-containing protein 20
Expression levels of ZSCAN20[ENSG00000121903.10]
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