EnhancerDB
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Enhancers that regulate SNRNP27[ENSG00000124380.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 70021345 70028555 enh18650 70120692 92137
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Placenta Lung (PC-9) Muscle (Myotube) Uterus Thymus Stomach
chr2 70048617 70048893 vista31970 70120692 71799
VISTA
chr2 70057532 70057914 vista31971 70120692 62778
VISTA
chr2 70082845 70088335 enh81712 70120692 32357
Prostate (PC-3) Epithelial (MCF-7)
chr2 70137188 70147795 enh5636 70120692 16496
Prostate (RWPE1) Uterus Blood (Karpas-422)
chr2 70141198 70141461 vista31972 70120692 20506
VISTA
chr2 70144957 70145388 vista31973 70120692 24265
VISTA
chr2 70145725 70146134 vista31974 70120692 25033
VISTA
chr2 70152325 70156635 enh18651 70120692 31633
Placenta Liver (HepG2) Large Intestine Lung (PC-9)
chr2 70154281 70154743 vista31975 70120692 33589
VISTA
chr2 70157845 70161995 enh81713 70120692 37153
Prostate (PC-3)
chr2 70160460 70161117 vista31976 70120692 39768
VISTA
chr2 70161598 70161791 vista31977 70120692 40906
VISTA
chr2 70168265 70176935 enh18652 70120692 47573
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr2 70170844 70171172 vista31978 70120692 50152
VISTA
chr2 70172627 70172794 vista31979 70120692 51935
VISTA
chr2 70173540 70174234 vista31980 70120692 52848
VISTA
chr2 70174757 70175015 vista31981 70120692 54065
VISTA
chr2 70183225 70187375 enh48287 70120692 62533
Thymus
chr2 70195265 70239804 enh5637 70120692 74573
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr2 70202880 70203539 vista31982 70120692 82188
VISTA
chr2 70205559 70206094 vista31983 70120692 84867
VISTA
chr2 70212443 70213458 vista31984 70120692 91751
VISTA
chr2 70216700 70217012 vista31985 70120692 96008
VISTA
Transcript facotrs that regulate SNRNP27[ENSG00000124380.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SNRNP27[ENSG00000124380.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 70146363 rs10165061 C T 13656 Pancreas 9.41789e-10 5831845
chr2 71099857 rs9677925 A G 967150 Ovary 0.272392 5837818
chr2 70222149 rs149480158 A T 89442 Uterus 0.297125 5832511
chr2 70027919 rs80250978 C T 92773 Thyroid 2.81951e-05 5831615
chr2 70086728 rs72839885 C T 33964 Adrenal 0.0134473 5831711
Details of SNRNP27[ENSG00000124380.6]
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Genomic Location chr2:70120692-70132707[+]
TSS 70120692
Gene Name SNRNP27
Ensembl ID ENSG00000124380.6
ENTREZID 11017
Uniprot
Q8WVK2
A8K513
Protein Name
U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
Expression levels of SNRNP27[ENSG00000124380.6]
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