EnhancerDB
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Enhancers that regulate SNRPC[ENSG00000124562.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 34618105 34636675 enh9069 34725183 88508
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 34625381 34625487 vista51683 34725183 99696
VISTA
chr6 34631608 34631780 vista51684 34725183 93403
VISTA
chr6 34639385 34654367 enh9070 34725183 70816
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Uterus Blood (T-cell) Stomach
chr6 34663389 34663600 vista51685 34725183 61583
VISTA
chr6 34670805 34679615 enh66192 34725183 45568
Cervix (HeLa-S3) Ovary Liver Stomach Pancreas Spleen Uterus Heart
chr6 34683278 34693275 enh23168 34725183 31908
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Placenta Lung (PC-9) Neural Stem Cells (H9)
chr6 34695716 34705475 enh46109 34725183 19708
Muscle (Myotube) Liver (HepG2) Stomach
chr6 34705689 34716095 enh23169 34725183 9088
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Stomach Placenta Lung (PC-9) Pancreas Epithelial (MCF-7)
chr6 34760607 34760986 vista51686 34725183 35424
VISTA
chr6 34761625 34765855 enh93490 34725183 36442
Liver (HepG2) Cervix (HeLa-S3) Liver Lung (PC-9) Stomach
chr6 34770425 34781530 enh38951 34725183 45242
Prostate (PC-3) Large Intestine Astrocyte Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Stomach
chr6 34782685 34789275 enh9071 34725183 57502
Muscle (A673) Blood (Karpas-422) Stomach
chr6 34794830 34799352 enh59611 34725183 69647
Skin (Keratinocyte) Prostate (RWPE1)
Transcript facotrs that regulate SNRPC[ENSG00000124562.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SNRPC[ENSG00000124562.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 34564066 rs205259 A G 161117 Heart 5.95725e-08 8982494
chr6 34618356 rs2744958 T C 106827 Spleen 0.110041 8982892
chr6 34416349 rs12529603 G A 308834 Uterus 0.362733 8981620
chr6 34798098 rs112327514 A G 56527 Thyroid 7.5993e-14 8984243
chr6 34571195 rs2103646 G A 153988 Liver 0.017204 8982565
Details of SNRPC[ENSG00000124562.5]
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Genomic Location chr6:34725183-34741571[+]
TSS 34725183
Gene Name SNRPC
Ensembl ID ENSG00000124562.5
ENTREZID 6631
Uniprot
Q5TAL4
P09234
Protein Name
U1 small nuclear ribonucleoprotein C
Expression levels of SNRPC[ENSG00000124562.5]
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