EnhancerDB
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Enhancers that regulate MCF2L[ENSG00000126217.16]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr13 113442545 113449015 enh47720 113548692 99677
Brain (SK-N-MC) Lung Stomach Colon (HCT116) Lung (PC-9) Thymus Heart
chr13 113451845 113459035 enh99131 113548692 89657
Uterus Lung (PC-9)
chr13 113464645 113469535 enh99132 113548692 79157
Uterus
chr13 113514166 113514374 vista17124 113548692 34318
VISTA
chr13 113549464 113549664 vista17125 113548692 772
VISTA
chr13 113554318 113562735 enh68643 113548692 5626
Liver (HepG2) Epithelial (MCF-7) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Stomach
chr13 113562235 113562531 vista17126 113548692 13543
VISTA
chr13 113565705 113569855 enh92501 113548692 17013
Liver (HepG2)
chr13 113578405 113591085 enh51726 113548692 29713
Liver (HepG2) Brain (SK-N-SH) Large Intestine Esophagus Pancreas Stomach
chr13 113585588 113585716 vista17127 113548692 36896
VISTA
chr13 113588902 113588931 vista17128 113548692 40210
VISTA
chr13 113592512 113599995 enh15513 113548692 43820
Brain (SK-N-SH) Lung Blood (OCI-LY7) Placenta Muscle (Myotube)
chr13 113597069 113597276 vista17129 113548692 48377
VISTA
chr13 113603305 113609215 enh92502 113548692 54613
Liver (HepG2) Stomach
chr13 113607211 113607493 vista17130 113548692 58519
VISTA
chr13 113617365 113621549 enh64759 113548692 68673
Uterus Heart
chr13 113624891 113625152 vista17131 113548692 76199
VISTA
chr13 113627190 113627495 vista17132 113548692 78498
VISTA
chr13 113634758 113635206 vista17133 113548692 86066
VISTA
chr13 113643205 113655175 enh43974 113548692 94513
Large Intestine Peripheral Blood (MM.1S) Colon (HCT116) Pancreas Muscle (Myotube) Stomach
Transcript facotrs that regulate MCF2L[ENSG00000126217.16]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr13 113548460 113549585 ZNF143 GTRD no Epithelial (MCF-7) 113548692 232 108090605
chr13 113548598 113549497 ZNF143 GTRD no Epithelial (MCF-7) 113548692 94 108090606
chr13 113548615 113549686 ZNF143 GTRD no Epithelial (MCF-7) 113548692 77 108090607
chr13 113548618 113549547 ZNF143 GTRD no Epithelial (MCF-7) 113548692 74 108090608
chr13 113548736 113549754 ZNF143 GTRD no Epithelial (MCF-7) 113548692 44 108090609
chr13 113548793 113549524 ZNF274 GTRD no Bone Marrow (K562) 113548692 101 108090610
chr13 113549041 113549528 ZNF274 GTRD no Bone Marrow (K562) 113548692 349 108090611
chr13 113549068 113549467 ZNF274 GTRD no Bone Marrow (K562) 113548692 376 108090612
chr13 113549103 113549739 POLR2A UCSC Txn Factor no Conserved 113548692 411 108090613
chr13 113549103 113549739 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 113548692 411 108090614
chr13 113549150 113549739 TCF7L2 GTRD no Colon (HCT116) 113548692 458 108090615
chr13 113549164 113549690 ZNF143 GTRD no Epithelial (MCF-7) 113548692 472 108090616
chr13 113549211 113549487 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 113548692 519 108090617
chr13 113549219 113549702 ZNF143 GTRD no Epithelial (MCF-7) 113548692 527 108090618
chr13 113549229 113549685 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 113548692 537 108090619
chr13 113549276 113549636 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 113548692 584 108090620
chr13 113549282 113549658 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 113548692 590 108090621
chr13 113549308 113549624 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 113548692 616 108090622
chr13 113549325 113549552 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 113548692 633 108090623
chr13 113549465 113549479 NR2F1 JASPAR yes 113548692 773 19346341
chr13 113549467 113549488 REST JASPAR yes 113548692 775 19346342
chr13 113549485 113549501 SRF JASPAR yes 113548692 793 19346343
chr13 113549486 113549498 SRF JASPAR yes 113548692 794 19346344
chr13 113549499 113549514 ZIC3 JASPAR yes 113548692 807 19346345
chr13 113549506 113549512 MAZ TRANSFAC yes 113548692 814 19346346
chr13 113549549 113549563 EBF1 JASPAR yes 113548692 857 19346347
chr13 113549551 113549562 EBF1 JASPAR yes 113548692 859 19346348
chr13 113549555 113549566 NFKB1 JASPAR yes 113548692 863 19346349
chr13 113549559 113549570 E2F4 JASPAR yes 113548692 867 19346350
chr13 113549559 113549570 E2F6 JASPAR yes 113548692 867 19346351
chr13 113549564 113549569 SP1 TRANSFAC yes 113548692 872 19346352
chr13 113549565 113549577 TFAP2A JASPAR yes 113548692 873 19346353
chr13 113549565 113549577 TFAP2B JASPAR yes 113548692 873 19346354
chr13 113549565 113549577 TFAP2C JASPAR yes 113548692 873 19346355
chr13 113549578 113549588 GCM2 JASPAR yes 113548692 886 19346356
chr13 113549582 113549595 NR2F1 JASPAR yes 113548692 890 19346357
chr13 113549600 113549619 REST JASPAR yes 113548692 908 19346358
chr13 113549605 113549618 TFAP2A JASPAR yes 113548692 913 19346359
chr13 113549605 113549618 TFAP2B JASPAR yes 113548692 913 19346360
chr13 113549613 113549630 ESR1 JASPAR yes 113548692 921 19346361
chr13 113549613 113549631 ESR2 JASPAR yes 113548692 921 19346362
chr13 113549614 113549629 ESR2 JASPAR yes 113548692 922 19346363
chr13 113549614 113549634 ESR1 JASPAR yes 113548692 922 19346364
chr13 113549632 113549637 SP1 TRANSFAC yes 113548692 940 19346365
chr13 113549641 113549648 PEA3 TRANSFAC yes 113548692 949 19346366
SNPs associated with MCF2L[ENSG00000126217.16], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr13 113634510 rs7316954 G C 0 Spleen 1.19344e-06 3408071
chr13 113635345 rs2993283 G A 0 Adrenal 0.0513851 3408087
Details of MCF2L[ENSG00000126217.16]
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Genomic Location chr13:113548692-113754053[+]
TSS 113548692
Gene Name MCF2L
Ensembl ID ENSG00000126217.16
ENTREZID 23263
Uniprot
O15068
Protein Name
Guanine nucleotide exchange factor DBS
MCF2L protein
Expression levels of MCF2L[ENSG00000126217.16]
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