EnhancerDB
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Enhancers that regulate CGNL1[ENSG00000128849.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr15 57566205 57570355 enh52019 57668165 97810
Large Intestine
chr15 57587005 57591155 enh88177 57668165 77010
Pancreas
chr15 57591749 57595929 enh87023 57668165 72236
Blood (GM12878)
chr15 57596345 57601075 enh75664 57668165 67090
Muscle (A673) Uterus Pancreas (Panc1)
chr15 57602525 57607555 enh52020 57668165 60610
Bone Marrow (K562) Stomach Large Intestine Heart
chr15 57611005 57635135 enh3617 57668165 33030
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Thymus Heart
chr15 57614367 57614619 vista20085 57668165 53546
VISTA
chr15 57643925 57651267 enh31403 57668165 16898
Prostate (RWPE1) Astrocyte Thyroid Muscle (Myoblast) Neural Stem Cells (H9)
chr15 57648977 57649377 vista20086 57668165 18788
VISTA
chr15 57654080 57659056 enh68939 57668165 9109
Neural Stem Cells (H9)
chr15 57671145 57686015 enh52021 57668165 2980
Liver (HepG2) Large Intestine Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Stomach
chr15 57702565 57706715 enh16162 57668165 34400
Placenta
chr15 57711825 57726915 enh16163 57668165 43660
Liver (HepG2) Large Intestine Bone (Osteoblast) Placenta Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr15 57730505 57740415 enh57667 57668165 62340
Brain (SK-N-MC) Lung (A549) Muscle (A673) Uterus Lung (PC-9) Neural Stem Cells (H9) Stomach
chr15 57748485 57753475 enh99237 57668165 80320
Uterus
chr15 57763209 57773475 enh31404 57668165 95044
Liver (HepG2) Large Intestine Astrocyte Bone (Osteoblast) Thyroid Pancreas Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript facotrs that regulate CGNL1[ENSG00000128849.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr15 57671912 57671922 CEBPB JASPAR yes 57668165 3747 23608197
chr15 57671912 57671922 CEBPE JASPAR yes 57668165 3747 23608198
chr15 57671912 57671922 CEBPG JASPAR yes 57668165 3747 23608199
chr15 57671940 57671954 SPIC JASPAR yes 57668165 3775 23608200
chr15 57671955 57671965 TFEB JASPAR yes 57668165 3790 23608201
chr15 57671955 57671965 TFEC JASPAR yes 57668165 3790 23608202
chr15 57671955 57671966 USF1 JASPAR yes 57668165 3790 23608203
chr15 57671955 57671966 USF2 JASPAR yes 57668165 3790 23608204
chr15 57671966 57671985 RFX2 JASPAR yes 57668165 3801 23608205
chr15 57671979 57671991 GRHL1 JASPAR yes 57668165 3814 23608206
chr15 57671980 57671990 TFCP2 JASPAR yes 57668165 3815 23608207
chr15 57671981 57671999 TP63 JASPAR yes 57668165 3816 23608208
chr15 57671981 57671999 TP73 JASPAR yes 57668165 3816 23608209
chr15 57671982 57671997 TP53 JASPAR yes 57668165 3817 23608210
chr15 57671992 57672005 POU2F2 JASPAR yes 57668165 3827 23608211
chr15 57672000 57672021 IRF1 JASPAR yes 57668165 3835 23608212
chr15 57672007 57672028 IRF1 JASPAR yes 57668165 3842 23608213
chr15 57672008 57672018 NFATC3 JASPAR yes 57668165 3843 23608214
chr15 57672008 57672029 IRF1 JASPAR yes 57668165 3843 23608215
chr15 57672010 57672017 NFATC2 JASPAR yes 57668165 3845 23608216
chr15 57672011 57672025 STAT1 JASPAR yes 57668165 3846 23608217
chr15 57672011 57672032 ZNF263 JASPAR yes 57668165 3846 23608218
chr15 57672013 57672028 FOXP1 JASPAR yes 57668165 3848 23608219
chr15 57672013 57672034 IRF1 JASPAR yes 57668165 3848 23608220
chr15 57672014 57672035 IRF1 JASPAR yes 57668165 3849 23608221
chr15 57672014 57672035 ZNF263 JASPAR yes 57668165 3849 23608222
chr15 57672015 57672020 ETS2 TRANSFAC yes 57668165 3850 23608223
chr15 57672020 57672035 FOXP1 JASPAR yes 57668165 3855 23608224
chr15 57672020 57672041 IRF1 JASPAR yes 57668165 3855 23608225
chr15 57672021 57672036 FOXP1 JASPAR yes 57668165 3856 23608226
chr15 57672024 57672039 PRDM1 JASPAR yes 57668165 3859 23608227
chr15 57672024 57672039 STAT2 JASPAR yes 57668165 3859 23608228
chr15 57672026 57672047 IRF1 JASPAR yes 57668165 3861 23608229
chr15 57672030 57672045 PRDM1 JASPAR yes 57668165 3865 23608230
chr15 57672034 57672055 ZNF263 JASPAR yes 57668165 3869 23608231
chr15 57672035 57672055 RREB1 JASPAR yes 57668165 3870 23608232
chr15 57672043 57672048 SP1 TRANSFAC yes 57668165 3878 23608233
chr15 57672048 57672063 MEF2C JASPAR yes 57668165 3883 23608234
chr15 57672050 57672060 NFATC3 JASPAR yes 57668165 3885 23608235
chr15 57672060 57672080 ESR1 JASPAR yes 57668165 3895 23608236
chr15 57672062 57672081 PAX5 JASPAR yes 57668165 3897 23608237
chr15 57672064 57672082 ESR2 JASPAR yes 57668165 3899 23608238
chr15 57672065 57672080 ESR2 JASPAR yes 57668165 3900 23608239
chr15 57672065 57672085 ESR1 JASPAR yes 57668165 3900 23608240
chr15 57672072 57672083 ESRRA JASPAR yes 57668165 3907 23608241
chr15 57672073 57672081 NR4A2 JASPAR yes 57668165 3908 23608242
chr15 57672074 57672084 RORA JASPAR yes 57668165 3909 23608243
chr15 57672074 57672088 NR2F1 JASPAR yes 57668165 3909 23608244
chr15 57672085 57672092 CEBPA TRANSFAC yes 57668165 3920 23608245
chr15 57672086 57672097 E2F6 JASPAR yes 57668165 3921 23608246
chr15 57672090 57672095 ETS2 TRANSFAC yes 57668165 3925 23608247
chr15 57672102 57672110 FOXO3 JASPAR yes 57668165 3937 23608248
chr15 57672139 57672160 ZNF263 JASPAR yes 57668165 3974 23608249
chr15 57672141 57672159 RARA JASPAR yes 57668165 3976 23608250
chr15 57672148 57672169 ZNF263 JASPAR yes 57668165 3983 23608251
chr15 57672155 57672175 TP63 JASPAR yes 57668165 3990 23608252
chr15 57672171 57672186 TFAP2A JASPAR yes 57668165 4006 23608253
chr15 57672174 57672186 TFAP2A JASPAR yes 57668165 4009 23608254
chr15 57672183 57672187 H1TF2 TRANSFAC yes 57668165 4018 23608255
chr15 57672183 57672187 NFE TRANSFAC yes 57668165 4018 23608256
chr15 57672183 57672187 SRF TRANSFAC yes 57668165 4018 23608257
chr15 57672187 57672192 GATA2 JASPAR yes 57668165 4022 23608258
chr15 57672199 57672205 GATA3 JASPAR yes 57668165 4034 23608259
chr15 57672208 57672224 POU4F2 JASPAR yes 57668165 4043 23608260
chr15 57672218 57672238 TBX19 JASPAR yes 57668165 4053 23608261
chr15 57672220 57672236 T JASPAR yes 57668165 4055 23608262
chr15 57672226 57672238 PROX1 JASPAR yes 57668165 4061 23608263
chr15 57672229 57672250 IRF1 JASPAR yes 57668165 4064 23608264
chr15 57672236 57672242 TCF4 TRANSFAC yes 57668165 4071 23608265
chr15 57672236 57672251 FOXP1 JASPAR yes 57668165 4071 23608266
chr15 57672242 57672248 TCF4 TRANSFAC yes 57668165 4077 23608267
chr15 57672248 57672252 YY1 TRANSFAC yes 57668165 4083 23608268
chr15 57672260 57672271 NFE2L2 JASPAR yes 57668165 4095 23608269
chr15 57672264 57672268 NFE TRANSFAC yes 57668165 4099 23608270
chr15 57672286 57672296 SREBF1 JASPAR yes 57668165 4121 23608271
chr15 57672286 57672296 SREBF2 JASPAR yes 57668165 4121 23608272
chr15 57672296 57672306 SREBF1 JASPAR yes 57668165 4131 23608273
chr15 57672298 57672315 ESR1 JASPAR yes 57668165 4133 23608274
chr15 57672301 57672322 ZNF263 JASPAR yes 57668165 4136 23608275
chr15 57672308 57672320 HINFP JASPAR yes 57668165 4143 23608276
chr15 57672312 57672320 SP1 TRANSFAC yes 57668165 4147 23608277
chr15 57672312 57672322 SP1 JASPAR yes 57668165 4147 23608278
chr15 57672364 57672384 TP53 JASPAR yes 57668165 4199 23608279
chr15 57672392 57672407 MEF2A JASPAR yes 57668165 4227 23608280
chr15 57672393 57672408 MEF2C JASPAR yes 57668165 4228 23608281
chr15 57672396 57672400 YY1 TRANSFAC yes 57668165 4231 23608282
chr15 57672400 57672415 MEF2A JASPAR yes 57668165 4235 23608283
chr15 57672401 57672416 MEF2C JASPAR yes 57668165 4236 23608284
chr15 57672402 57672414 MEF2A JASPAR yes 57668165 4237 23608285
chr15 57672402 57672414 MEF2B JASPAR yes 57668165 4237 23608286
chr15 57672402 57672414 MEF2D JASPAR yes 57668165 4237 23608287
chr15 57672404 57672408 YY1 TRANSFAC yes 57668165 4239 23608288
chr15 57672419 57672432 NFKB1 JASPAR yes 57668165 4254 23608289
chr15 57672419 57672432 NFKB2 JASPAR yes 57668165 4254 23608290
chr15 57672422 57672433 CEBPB JASPAR yes 57668165 4257 23608291
chr15 57672425 57672437 YY1 JASPAR yes 57668165 4260 23608292
chr15 57672447 57672465 RARA JASPAR yes 57668165 4282 23608293
chr15 57672454 57672467 NR2F1 JASPAR yes 57668165 4289 23608294
chr15 57672458 57672466 CREB1 JASPAR yes 57668165 4293 23608295
chr15 57672462 57672472 SREBF2 JASPAR yes 57668165 4297 23608296
chr15 57672462 57672473 USF1 JASPAR yes 57668165 4297 23608297
chr15 57672462 57672473 USF2 JASPAR yes 57668165 4297 23608298
chr15 57672465 57672478 NFKB1 JASPAR yes 57668165 4300 23608299
chr15 57672470 57672476 ZNF354C JASPAR yes 57668165 4305 23608300
chr15 57672471 57672481 ID4 JASPAR yes 57668165 4306 23608301
chr15 57672472 57672481 SNAI2 JASPAR yes 57668165 4307 23608302
chr15 57672473 57672478 USF2 TRANSFAC yes 57668165 4308 23608303
chr15 57672511 57672522 FOSL2 JASPAR yes 57668165 4346 23608304
chr15 57672521 57672530 HIC2 JASPAR yes 57668165 4356 23608305
chr15 57672522 57672535 ZBTB18 JASPAR yes 57668165 4357 23608306
chr15 57672523 57672535 NHLH1 JASPAR yes 57668165 4358 23608307
chr15 57672524 57672534 MSC JASPAR yes 57668165 4359 23608308
chr15 57672524 57672534 TFAP4 JASPAR yes 57668165 4359 23608309
chr15 57672559 57672567 FOXL1 JASPAR yes 57668165 4394 23608310
chr15 57672576 57672590 FOXF2 JASPAR yes 57668165 4411 23608311
chr15 57672579 57672590 FOXP2 JASPAR yes 57668165 4414 23608312
chr15 57672580 57672588 FOXO3 JASPAR yes 57668165 4415 23608313
chr15 57672581 57672588 FOXD2 JASPAR yes 57668165 4416 23608314
chr15 57672581 57672588 FOXI1 JASPAR yes 57668165 4416 23608315
chr15 57672581 57672588 FOXL1 JASPAR yes 57668165 4416 23608316
chr15 57672581 57672588 FOXO4 JASPAR yes 57668165 4416 23608317
chr15 57672581 57672588 FOXO6 JASPAR yes 57668165 4416 23608318
chr15 57672581 57672588 FOXP3 JASPAR yes 57668165 4416 23608319
chr15 57672581 57672589 FOXD1 JASPAR yes 57668165 4416 23608320
chr15 57672581 57672589 FOXO3 JASPAR yes 57668165 4416 23608321
chr15 57672588 57672593 GATA2 JASPAR yes 57668165 4423 23608322
chr15 57672600 57672612 TFAP2A JASPAR yes 57668165 4435 23608323
chr15 57672600 57672612 TFAP2B JASPAR yes 57668165 4435 23608324
chr15 57672600 57672612 TFAP2C JASPAR yes 57668165 4435 23608325
chr15 57672600 57672613 TFAP2A JASPAR yes 57668165 4435 23608326
chr15 57672600 57672613 TFAP2B JASPAR yes 57668165 4435 23608327
chr15 57672600 57672613 TFAP2C JASPAR yes 57668165 4435 23608328
chr15 57672608 57672613 SP1 TRANSFAC yes 57668165 4443 23608329
chr15 57672608 57672622 JUN JASPAR yes 57668165 4443 23608330
chr15 57672614 57672621 JUN TRANSFAC yes 57668165 4449 23608331
chr15 57672616 57672627 USF1 JASPAR yes 57668165 4451 23608332
chr15 57672619 57672628 ZEB1 JASPAR yes 57668165 4454 23608333
chr15 57672621 57672626 SP1 TRANSFAC yes 57668165 4456 23608334
chr15 57672623 57672628 TFAP2A TRANSFAC yes 57668165 4458 23608335
chr15 57672623 57672629 MZF1 JASPAR yes 57668165 4458 23608336
chr15 57672671 57672678 SPIB JASPAR yes 57668165 4506 23608337
chr15 57672673 57672688 AR JASPAR yes 57668165 4508 23608338
chr15 57672673 57672690 NR3C1 JASPAR yes 57668165 4508 23608339
chr15 57672673 57672690 NR3C2 JASPAR yes 57668165 4508 23608340
chr15 57672702 57672706 LFA1 TRANSFAC yes 57668165 4537 23608341
chr15 57672703 57672713 ID4 JASPAR yes 57668165 4538 23608342
chr15 57672703 57672713 TCF4 JASPAR yes 57668165 4538 23608343
chr15 57672705 57672710 USF2 TRANSFAC yes 57668165 4540 23608344
chr15 57672746 57672752 NFIC JASPAR yes 57668165 4581 23608345
chr15 57672785 57672789 YY1 TRANSFAC yes 57668165 4620 23608346
chr15 57672845 57672864 REST JASPAR yes 57668165 4680 23608347
chr15 57672867 57672872 GATA2 JASPAR yes 57668165 4702 23608348
chr15 57672867 57672883 ZNF143 JASPAR yes 57668165 4702 23608349
chr15 57672870 57672882 PBX1 JASPAR yes 57668165 4705 23608350
chr15 57672876 57672882 TCF4 TRANSFAC yes 57668165 4711 23608351
chr15 57672881 57672902 ZNF263 JASPAR yes 57668165 4716 23608352
chr15 57672884 57672899 NR2C2 JASPAR yes 57668165 4719 23608353
chr15 57672884 57672905 ZNF263 JASPAR yes 57668165 4719 23608354
chr15 57672886 57672894 TBX15 JASPAR yes 57668165 4721 23608355
chr15 57672887 57672892 SP1 TRANSFAC yes 57668165 4722 23608356
chr15 57672891 57672912 ZNF263 JASPAR yes 57668165 4726 23608357
chr15 57672894 57672907 ELF1 JASPAR yes 57668165 4729 23608358
chr15 57672897 57672903 PEA3 TRANSFAC yes 57668165 4732 23608359
chr15 57672916 57672928 HES7 JASPAR yes 57668165 4751 23608360
chr15 57672916 57672928 PKNOX1 JASPAR yes 57668165 4751 23608361
chr15 57672916 57672928 PKNOX2 JASPAR yes 57668165 4751 23608362
chr15 57672916 57672928 TGIF1 JASPAR yes 57668165 4751 23608363
chr15 57672916 57672928 TGIF2 JASPAR yes 57668165 4751 23608364
chr15 57672917 57672926 SNAI2 JASPAR yes 57668165 4752 23608365
chr15 57672917 57672927 HEY2 JASPAR yes 57668165 4752 23608366
chr15 57672917 57672927 ID4 JASPAR yes 57668165 4752 23608367
chr15 57672917 57672927 TCF3 JASPAR yes 57668165 4752 23608368
chr15 57672917 57672927 TCF4 JASPAR yes 57668165 4752 23608369
chr15 57672932 57672947 HSF1 JASPAR yes 57668165 4767 23608370
chr15 57672955 57672966 ELK4 JASPAR yes 57668165 4790 23608371
chr15 57672955 57672966 FLI1 JASPAR yes 57668165 4790 23608372
chr15 57672955 57672968 ELF3 JASPAR yes 57668165 4790 23608373
chr15 57672956 57672966 ETV6 JASPAR yes 57668165 4791 23608374
chr15 57672956 57672967 ELF5 JASPAR yes 57668165 4791 23608375
chr15 57672956 57672968 EHF JASPAR yes 57668165 4791 23608376
chr15 57672956 57672968 ELF1 JASPAR yes 57668165 4791 23608377
chr15 57672956 57672968 ELF4 JASPAR yes 57668165 4791 23608378
chr15 57672956 57672969 ELF1 JASPAR yes 57668165 4791 23608379
chr15 57672957 57672964 SPI1 JASPAR yes 57668165 4792 23608380
chr15 57672957 57672965 EHF JASPAR yes 57668165 4792 23608381
chr15 57672957 57672965 FEV JASPAR yes 57668165 4792 23608382
chr15 57672970 57672975 ETS2 TRANSFAC yes 57668165 4805 23608383
chr15 57672994 57673006 YY1 JASPAR yes 57668165 4829 23608384
chr15 57672995 57673013 SRF JASPAR yes 57668165 4830 23608385
chr15 57672996 57673011 MEF2C JASPAR yes 57668165 4831 23608386
chr15 57672999 57673003 YY1 TRANSFAC yes 57668165 4834 23608387
chr15 57673002 57673012 NFIA JASPAR yes 57668165 4837 23608388
chr15 57673003 57673012 NFIX JASPAR yes 57668165 4838 23608389
chr15 57673004 57673010 NFIC JASPAR yes 57668165 4839 23608390
chr15 57673010 57673014 YY1 TRANSFAC yes 57668165 4845 23608391
chr15 57673016 57673019 MYB TRANSFAC yes 57668165 4851 23608392
chr15 57673068 57673083 HNF4G JASPAR yes 57668165 4903 23608393
chr15 57673069 57673084 HNF4A JASPAR yes 57668165 4904 23608394
chr15 57673072 57673078 TCF4 TRANSFAC yes 57668165 4907 23608395
chr15 57673092 57673104 NHLH1 JASPAR yes 57668165 4927 23608396
chr15 57673093 57673103 NHLH1 JASPAR yes 57668165 4928 23608397
chr15 57673130 57673146 RFX4 JASPAR yes 57668165 4965 23608398
chr15 57673131 57673136 GATA1 TRANSFAC yes 57668165 4966 23608399
chr15 57673142 57673158 NFYA JASPAR yes 57668165 4977 23608400
chr15 57673143 57673161 NFYA JASPAR yes 57668165 4978 23608401
chr15 57673145 57673151 NFIC JASPAR yes 57668165 4980 23608402
chr15 57673147 57673151 H1TF2 TRANSFAC yes 57668165 4982 23608403
chr15 57673147 57673151 NFE TRANSFAC yes 57668165 4982 23608404
chr15 57673147 57673151 SRF TRANSFAC yes 57668165 4982 23608405
chr15 57673152 57673156 LFA1 TRANSFAC yes 57668165 4987 23608406
SNPs associated with CGNL1[ENSG00000128849.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr15 57800109 rs11071324 C T 0 Esophagus 1.67689e-12 3979460
chr15 57684180 rs67057176 T C 0 Esophagus 0.0522596 3978424
chr15 57007632 rs78360845 T C 660533 Heart 0.289509 3972838
chr15 57680959 rs907472 G A 0 Heart 0.0761188 3978368
chr15 57770642 rs1992875 A G 0 Pancreas 0.00641212 3979092
chr15 57598471 rs734101 A C,G 69694 Breast 0.278229 3977244
chr15 57959835 rs1559775 A G 116910 Uterus 0.386282 3981010
chr15 58122823 rs6493954 C T 279898 Liver 0.273021 3982473
chr15 56787709 rs1711506 T C 880456 Adrenal 0.231258 3972120
Details of CGNL1[ENSG00000128849.9]
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Genomic Location chr15:57668165-57842925[+]
TSS 57668165
Gene Name CGNL1
Ensembl ID ENSG00000128849.9
ENTREZID 84952
Uniprot
Q0VF96
Protein Name
CGNL1 protein
Cingulin-like protein 1
Expression levels of CGNL1[ENSG00000128849.9]
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