EnhancerDB
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Enhancers that regulate HAPLN2[ENSG00000132702.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 156472305 156489855 enh43055 156589086 99231
Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Blood (GM12878) Stomach Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Uterus Blood (T-cell) Heart
chr1 156494222 156494678 vista3468 156589086 94408
VISTA
chr1 156506565 156511875 enh12299 156589086 77211
Placenta
chr1 156517285 156521435 enh12300 156589086 67651
Placenta
chr1 156541089 156541488 vista3469 156589086 47598
VISTA
chr1 156563065 156569635 enh659 156589086 19451
Blood (Karpas-422)
chr1 156574605 156581244 enh660 156589086 7842
Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
chr1 156586355 156586564 vista3470 156589086 2522
VISTA
chr1 156597225 156601375 enh87635 156589086 8139
Pancreas
chr1 156627761 156638505 enh12301 156589086 38675
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Uterus Thyroid Embryonic Stem Cell Line (H1-hESC) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 156629760 156630406 vista3471 156589086 40674
VISTA
chr1 156630249 156635284 vista106 156589086 41163
VISTA
chr1 156631732 156631960 vista3472 156589086 42646
VISTA
chr1 156632199 156632473 vista3473 156589086 43113
VISTA
chr1 156634807 156635020 vista3474 156589086 45721
VISTA
chr1 156645551 156645913 vista3475 156589086 56465
VISTA
chr1 156652128 156666195 enh43056 156589086 63042
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr1 156662788 156663099 vista3476 156589086 73702
VISTA
chr1 156663993 156664153 vista3477 156589086 74907
VISTA
chr1 156676478 156676824 vista3478 156589086 87392
VISTA
chr1 156677217 156677612 vista3479 156589086 88131
VISTA
chr1 156679562 156679883 vista3480 156589086 90476
VISTA
chr1 156680485 156687382 enh85981 156589086 91399
Colon (HCT116) Lung (PC-9)
Transcript facotrs that regulate HAPLN2[ENSG00000132702.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 156583115 156588278 ZNF274 GTRD no Cervix (HeLa-S3) 156589086 808 107836879
chr1 156585968 156586692 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2394 107836880
chr1 156586136 156586706 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 156589086 2380 107836881
chr1 156586150 156586816 TCF7L2 GTRD no Colon (HCT116) 156589086 2270 107836882
chr1 156586174 156586610 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2476 107836883
chr1 156586182 156586838 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 156589086 2248 107836884
chr1 156586190 156586706 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 156589086 2380 107836885
chr1 156586191 156586707 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2379 107836886
chr1 156586193 156586689 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 156589086 2397 107836887
chr1 156586209 156586785 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2301 107836888
chr1 156586217 156586715 GATA3 UCSC Txn Factor no Conserved 156589086 2371 107836889
chr1 156586220 156586664 GATA2 UCSC Txn Factor no Conserved 156589086 2422 107836890
chr1 156586236 156586676 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2410 107836891
chr1 156586236 156586692 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2394 107836892
chr1 156586241 156586697 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2389 107836893
chr1 156586250 156586654 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2432 107836894
chr1 156586253 156586583 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2503 107836895
chr1 156586259 156586615 RCOR1 UCSC Txn Factor no Conserved 156589086 2471 107836896
chr1 156586259 156586615 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2471 107836897
chr1 156586260 156586676 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2410 107836898
chr1 156586269 156586513 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2573 107836899
chr1 156586274 156586644 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2442 107836900
chr1 156586276 156586586 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2500 107836901
chr1 156586276 156586640 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2446 107836902
chr1 156586279 156586629 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2457 107836903
chr1 156586286 156586642 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 156589086 2444 107836904
chr1 156586294 156586634 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 156589086 2452 107836905
chr1 156586296 156586632 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2454 107836906
chr1 156586299 156586579 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 156589086 2507 107836907
chr1 156586299 156586600 NR3C1 UCSC Txn Factor no Conserved 156589086 2486 107836908
chr1 156586300 156586746 ZNF143 GTRD no Epithelial (MCF-7) 156589086 2340 107836909
chr1 156586308 156586538 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2548 107836910
chr1 156586309 156586579 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2507 107836911
chr1 156586309 156586591 FOXA1 UCSC Txn Factor no Conserved 156589086 2495 107836912
chr1 156586311 156586647 EP300 UCSC Txn Factor no Conserved 156589086 2439 107836913
chr1 156586311 156586736 ZNF143 GTRD no Epithelial (MCF-7) 156589086 2350 107836914
chr1 156586313 156586568 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2518 107836915
chr1 156586313 156586589 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2497 107836916
chr1 156586317 156586596 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 156589086 2490 107836917
chr1 156586321 156586579 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 156589086 2507 107836918
chr1 156586321 156586591 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 156589086 2495 107836919
chr1 156586321 156586601 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2485 107836920
chr1 156586333 156586507 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 156589086 2579 107836921
chr1 156586336 156586540 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 156589086 2546 107836922
chr1 156586336 156586600 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2486 107836923
chr1 156586343 156586539 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 156589086 2547 107836924
chr1 156586349 156586499 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 156589086 2587 107836925
chr1 156586349 156586605 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2481 107836926
chr1 156586351 156586533 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2553 107836927
chr1 156586357 156586372 RFX5 JASPAR yes 156589086 2714 118377921
chr1 156586360 156586583 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2503 107836928
chr1 156586378 156586382 YY1 TRANSFAC yes 156589086 2704 118377922
chr1 156586390 156586409 CTCF JASPAR yes 156589086 2677 118377923
chr1 156586400 156586411 TFAP2A JASPAR yes 156589086 2675 118377924
chr1 156586400 156586411 TFAP2B JASPAR yes 156589086 2675 118377925
chr1 156586400 156586411 TFAP2C JASPAR yes 156589086 2675 118377926
chr1 156586407 156586419 FOXI1 JASPAR yes 156589086 2667 118377927
chr1 156586407 156586611 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2475 107836929
chr1 156586422 156586428 NFIC JASPAR yes 156589086 2658 118377928
chr1 156586422 156586436 TLX1 JASPAR yes 156589086 2650 118377929
chr1 156586423 156586437 TLX1 JASPAR yes 156589086 2649 118377930
chr1 156586425 156586436 FLI1 JASPAR yes 156589086 2650 118377931
chr1 156586426 156586441 NFYB JASPAR yes 156589086 2645 118377932
chr1 156586428 156586444 NFYA JASPAR yes 156589086 2642 118377933
chr1 156586429 156586440 DUX4 JASPAR yes 156589086 2646 118377934
chr1 156586429 156586447 NFYA JASPAR yes 156589086 2639 118377935
chr1 156586433 156586437 H1TF2 TRANSFAC yes 156589086 2649 118377936
chr1 156586433 156586437 NFE TRANSFAC yes 156589086 2649 118377937
chr1 156586433 156586437 SRF TRANSFAC yes 156589086 2649 118377938
chr1 156586445 156586592 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 156589086 2494 107836930
chr1 156586446 156586464 ESR2 JASPAR yes 156589086 2622 118377939
chr1 156586447 156586464 NR3C1 JASPAR yes 156589086 2622 118377940
chr1 156586447 156586464 NR3C2 JASPAR yes 156589086 2622 118377941
chr1 156586447 156586465 ESR1 JASPAR yes 156589086 2621 118377942
chr1 156586448 156586463 ESR2 JASPAR yes 156589086 2623 118377943
chr1 156586448 156586468 ESR1 JASPAR yes 156589086 2618 118377944
chr1 156586449 156586464 AR JASPAR yes 156589086 2622 118377945
chr1 156586461 156586465 NFE TRANSFAC yes 156589086 2621 118377946
chr1 156586482 156586486 YY1 TRANSFAC yes 156589086 2600 118377947
chr1 156586492 156586503 EBF1 JASPAR yes 156589086 2583 118377948
chr1 156586493 156586504 EBF1 JASPAR yes 156589086 2582 118377949
chr1 156586497 156586510 SMAD2 JASPAR yes 156589086 2576 118377950
chr1 156586512 156586522 SP1 JASPAR yes 156589086 2564 118377951
chr1 156586515 156586525 SP1 JASPAR yes 156589086 2561 118377952
chr1 156586518 156586539 ZNF263 JASPAR yes 156589086 2547 118377953
chr1 156586519 156586526 CEBPA TRANSFAC yes 156589086 2560 118377954
chr1 156586520 156586531 E2F6 JASPAR yes 156589086 2555 118377955
chr1 156586524 156586529 ETS2 TRANSFAC yes 156589086 2557 118377956
chr1 156586552 156586558 GATA3 JASPAR yes 156589086 2528 118377957
SNPs associated with HAPLN2[ENSG00000132702.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 157330887 rs873448 T A,G 735370 Heart 0.0274341 654615
chr1 156675915 rs142430119 G C 80398 Thyroid 0.231356 650680
chr1 156647931 rs12035664 G A 52414 Liver 0.326271 650364
Details of HAPLN2[ENSG00000132702.8]
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Genomic Location chr1:156589086-156595517[+]
TSS 156589086
Gene Name HAPLN2
Ensembl ID ENSG00000132702.8
ENTREZID 60484
Uniprot
Q9GZV7
Protein Name
Hyaluronan and proteoglycan link protein 2
Expression levels of HAPLN2[ENSG00000132702.8]
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