EnhancerDB
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Enhancers that regulate PIK3C2B[ENSG00000133056.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 204365519 204372255 enh12581 204463852 91597
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Blood (T-cell) Stomach Placenta Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
chr1 204381705 204391743 enh12582 204463852 72109
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Pancreas Neural Stem Cells (H9)
chr1 204383374 204383435 vista4685 204463852 80417
VISTA
chr1 204386444 204387188 vista4686 204463852 76664
VISTA
chr1 204387566 204387645 vista4687 204463852 76207
VISTA
chr1 204388302 204388627 vista4688 204463852 75225
VISTA
chr1 204389721 204389989 vista4689 204463852 73863
VISTA
chr1 204395183 204395520 vista4690 204463852 68332
VISTA
chr1 204398565 204403135 enh98599 204463852 60717
Cervix (HeLa-S3) Uterus
chr1 204405628 204410234 enh89533 204463852 53618
Prostate (RWPE1)
chr1 204411085 204417893 enh12583 204463852 45959
Placenta Prostate (RWPE1)
chr1 204422279 204422591 vista4691 204463852 41261
VISTA
chr1 204423958 204424935 vista128 204463852 38917
VISTA
chr1 204428545 204433215 enh12584 204463852 30637
Placenta Heart
chr1 204430759 204431008 vista4692 204463852 32844
VISTA
chr1 204432329 204432499 vista4693 204463852 31353
VISTA
chr1 204434923 204435081 vista4694 204463852 28771
VISTA
chr1 204435094 204435487 vista4695 204463852 28365
VISTA
chr1 204440545 204458655 enh12585 204463852 5197
Cervix (HeLa-S3) Epithelial (MCF-7) Esophagus Liver Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Thymus Heart
chr1 204449745 204450007 vista4696 204463852 13845
VISTA
chr1 204466245 204479448 enh886 204463852 2393
Cervix (HeLa-S3) Prostate (RWPE1) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Kidney
chr1 204476628 204477018 vista4697 204463852 12776
VISTA
chr1 204486309 204486424 vista4698 204463852 22457
VISTA
chr1 204487665 204493515 enh887 204463852 23813
Blood (T-cell) Esophagus Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 204527225 204550956 enh888 204463852 63373
Bone Marrow (K562) Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Lung (PC-9) Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Thyroid Peripheral Blood (MM.1S) Stomach Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Thymus Epithelial (MCF-7)
chr1 204531285 204531644 vista4699 204463852 67433
VISTA
chr1 204551125 204563635 enh889 204463852 87273
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Blood (OCI-LY7) Stomach Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Blood (T-cell) Epithelial (MCF-7)
Transcript facotrs that regulate PIK3C2B[ENSG00000133056.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 204465405 204467247 TCF7L2 GTRD no Colon (HCT116) 204463852 1553 21370628
chr1 204466719 204467407 TCF7L2 GTRD no Colon (HCT116) 204463852 2867 21370629
chr1 204468606 204469082 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 204463852 4754 21370630
chr1 204468712 204468724 ZBTB7C JASPAR yes 204463852 4860 34706616
chr1 204468712 204468728 GLIS1 JASPAR yes 204463852 4860 34706617
chr1 204468715 204468732 ZNF410 JASPAR yes 204463852 4863 34706618
chr1 204468729 204468745 POU4F3 JASPAR yes 204463852 4877 34706619
chr1 204468731 204468743 FOXI1 JASPAR yes 204463852 4879 34706620
chr1 204468738 204468746 FOXL1 JASPAR yes 204463852 4886 34706621
chr1 204468743 204468748 MYB TRANSFAC yes 204463852 4891 34706622
chr1 204468757 204468773 ZNF143 JASPAR yes 204463852 4905 34706623
chr1 204468761 204468771 TEAD1 JASPAR yes 204463852 4909 34706624
chr1 204468761 204468771 TEAD4 JASPAR yes 204463852 4909 34706625
chr1 204468761 204468773 TEAD1 JASPAR yes 204463852 4909 34706626
chr1 204468762 204468770 TEAD3 JASPAR yes 204463852 4910 34706627
chr1 204468767 204468771 H1TF2 TRANSFAC yes 204463852 4915 34706628
chr1 204468767 204468771 NFE TRANSFAC yes 204463852 4915 34706629
chr1 204468767 204468771 SRF TRANSFAC yes 204463852 4915 34706630
chr1 204468791 204468801 CEBPB JASPAR yes 204463852 4939 34706631
chr1 204468791 204468801 CEBPD JASPAR yes 204463852 4939 34706632
chr1 204468791 204468801 CEBPE JASPAR yes 204463852 4939 34706633
chr1 204468806 204468823 BCL6B JASPAR yes 204463852 4954 34706634
chr1 204468807 204468822 STAT1 JASPAR yes 204463852 4955 34706635
chr1 204468809 204468820 STAT1 JASPAR yes 204463852 4957 34706636
chr1 204468825 204468838 EOMES JASPAR yes 204463852 4973 34706637
chr1 204468827 204468837 TBR1 JASPAR yes 204463852 4975 34706638
chr1 204468827 204468838 TBX2 JASPAR yes 204463852 4975 34706639
chr1 204468828 204468838 TBX21 JASPAR yes 204463852 4976 34706640
chr1 204468836 204468839 MYB TRANSFAC yes 204463852 4984 34706641
chr1 204468852 204468869 BCL6B JASPAR yes 204463852 5000 34706642
SNPs associated with PIK3C2B[ENSG00000133056.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 204441440 rs190408735 C T 0 Esophagus 0.311944 876478
chr1 204406421 rs6668749 G T 0 Esophagus 2.88102e-07 876109
chr1 204441440 rs190408735 C T 0 Heart 0.048089 876478
chr1 204696320 rs74138548 T C 232468 Heart 0.262901 878657
chr1 205272292 rs7550061 C G,T 808440 Pancreas 0.212511 882058
chr1 204662298 rs115395269 A T 198446 Breast 0.0136412 878143
chr1 205310206 rs11240446 T C 846354 Spleen 0.181065 882497
chr1 205308592 rs11240444 G A 844740 Ovary 0.130441 882485
chr1 204450467 rs938126 C T 0 Thyroid 0.0680328 876584
chr1 204431965 rs61761700 C T 0 Liver 0.0247072 876381
chr1 204448441 rs10640159 C CCTCT 0 Lung 0.053176 876555
Details of PIK3C2B[ENSG00000133056.9]
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Genomic Location chr1:204391756-204463852[-]
TSS 204463852
Gene Name PIK3C2B
Ensembl ID ENSG00000133056.9
ENTREZID 5287
Uniprot
Q4LE65
O00750
A2RUF7
Protein Name
catalytic subunit type 2 beta
PIK3C2B protein
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta
Phosphatidylinositol-4-phosphate 3-kinase
Expression levels of PIK3C2B[ENSG00000133056.9]
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