EnhancerDB
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Enhancers that regulate ARNTL[ENSG00000133794.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 13202665 13207375 enh110729 13298199 90824
Cervix (HeLa-S3)
chr11 13226465 13248095 enh28610 13298199 50104
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Colon (HCT116) Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus
chr11 13238046 13238305 vista9712 13298199 59894
VISTA
chr11 13244798 13244951 vista9713 13298199 53248
VISTA
chr11 13278525 13285915 enh13792 13298199 12284
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr11 13283262 13283494 vista9714 13298199 14705
VISTA
chr11 13288445 13292619 enh58329 13298199 5580
Esophagus Skin (Keratinocyte) Thyroid
chr11 13299973 13300299 vista9715 13298199 1774
VISTA
chr11 13306605 13312855 enh57576 13298199 8406
Prostate (PC-3) Brain (SK-N-SH) Blood (T-cell) Lung (A549)
chr11 13317485 13321815 enh92282 13298199 19286
Spleen Liver (HepG2) Stomach
chr11 13324606 13330203 enh43496 13298199 26407
Muscle (Myotube) Brain (SK-N-SH)
chr11 13327996 13328024 vista9716 13298199 29797
VISTA
chr11 13331249 13342718 enh28611 13298199 33050
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Thyroid Muscle (Myoblast) Uterus Blood (T-cell) Epithelial (MCF-7)
chr11 13349249 13368067 enh28612 13298199 51050
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
chr11 13351311 13351564 vista9717 13298199 53112
VISTA
chr11 13359856 13360227 vista9718 13298199 61657
VISTA
chr11 13373049 13373395 vista9719 13298199 74850
VISTA
Transcript facotrs that regulate ARNTL[ENSG00000133794.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr11 13299651 13300021 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 13298199 1452 107959803
chr11 13299830 13300094 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13298199 1631 107959804
chr11 13299927 13300053 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 13298199 1728 107959805
chr11 13299993 13300008 NR2C2 JASPAR yes 13298199 1794 114044545
chr11 13299995 13300005 SP1 JASPAR yes 13298199 1796 114044546
chr11 13299995 13300016 ZNF263 JASPAR yes 13298199 1796 114044547
chr11 13299996 13300004 EHF JASPAR yes 13298199 1797 114044548
chr11 13299999 13300020 ZNF263 JASPAR yes 13298199 1800 114044549
chr11 13300000 13300021 ZNF263 JASPAR yes 13298199 1801 114044550
chr11 13300001 13300018 PAX1 JASPAR yes 13298199 1802 114044551
chr11 13300001 13300018 PAX9 JASPAR yes 13298199 1802 114044552
chr11 13300002 13300016 PAX6 JASPAR yes 13298199 1803 114044553
chr11 13300002 13300021 PAX5 JASPAR yes 13298199 1803 114044554
chr11 13300023 13300038 ZBTB33 JASPAR yes 13298199 1824 114044555
chr11 13300026 13300039 TFAP2A JASPAR yes 13298199 1827 114044556
chr11 13300026 13300039 TFAP2B JASPAR yes 13298199 1827 114044557
chr11 13300026 13300039 TFAP2C JASPAR yes 13298199 1827 114044558
chr11 13300033 13300043 SP1 JASPAR yes 13298199 1834 114044559
chr11 13300040 13300045 SP1 TRANSFAC yes 13298199 1841 114044560
chr11 13300043 13300050 SP1 TRANSFAC yes 13298199 1844 114044561
chr11 13300043 13300053 SP1 JASPAR yes 13298199 1844 114044562
chr11 13300044 13300052 SP1 TRANSFAC yes 13298199 1845 114044563
chr11 13300044 13300053 SP1 TRANSFAC yes 13298199 1845 114044564
chr11 13300044 13300054 SP1 JASPAR yes 13298199 1845 114044565
chr11 13300045 13300050 SP1 TRANSFAC yes 13298199 1846 114044566
chr11 13300045 13300056 E2F4 JASPAR yes 13298199 1846 114044567
chr11 13300046 13300051 SP1 TRANSFAC yes 13298199 1847 114044568
chr11 13300046 13300052 SP1 TRANSFAC yes 13298199 1847 114044569
chr11 13300050 13300056 MAZ TRANSFAC yes 13298199 1851 114044570
chr11 13300072 13300077 TFAP2A TRANSFAC yes 13298199 1873 114044571
chr11 13300072 13300078 MZF1 JASPAR yes 13298199 1873 114044572
chr11 13300086 13300091 SP1 TRANSFAC yes 13298199 1887 114044573
chr11 13300088 13300095 SP1 TRANSFAC yes 13298199 1889 114044574
chr11 13300089 13300096 SP1 TRANSFAC yes 13298199 1890 114044575
chr11 13300090 13300095 SP1 TRANSFAC yes 13298199 1891 114044576
chr11 13300090 13300096 SP1 TRANSFAC yes 13298199 1891 114044577
chr11 13300098 13300117 REST JASPAR yes 13298199 1899 114044578
chr11 13300125 13300725 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 13298199 1926 107959806
chr11 13300128 13300141 NFKB1 JASPAR yes 13298199 1929 114044579
chr11 13300128 13300141 NFKB2 JASPAR yes 13298199 1929 114044580
chr11 13300129 13300139 RELA JASPAR yes 13298199 1930 114044581
chr11 13300129 13300140 NFKB1 JASPAR yes 13298199 1930 114044582
chr11 13300130 13300139 NF-kappaB TRANSFAC yes 13298199 1931 114044583
chr11 13300130 13300140 NFKB1 JASPAR yes 13298199 1931 114044584
chr11 13300130 13300140 RELA JASPAR yes 13298199 1931 114044585
chr11 13300130 13300141 NFKB1 JASPAR yes 13298199 1931 114044586
chr11 13300131 13300141 RELA JASPAR yes 13298199 1932 114044587
chr11 13300131 13300141 REL JASPAR yes 13298199 1932 114044588
chr11 13300135 13300148 TFAP2A JASPAR yes 13298199 1936 114044589
chr11 13300135 13300148 TFAP2C JASPAR yes 13298199 1936 114044590
chr11 13300149 13300154 SP1 TRANSFAC yes 13298199 1950 114044591
chr11 13300154 13300166 INSM1 JASPAR yes 13298199 1955 114044592
chr11 13300178 13300183 SP1 TRANSFAC yes 13298199 1979 114044593
chr11 13300195 13300199 H4TF2 TRANSFAC yes 13298199 1996 114044594
chr11 13300201 13300206 SP1 TRANSFAC yes 13298199 2002 114044595
chr11 13300214 13300230 ZNF143 JASPAR yes 13298199 2015 114044596
chr11 13300226 13300238 INSM1 JASPAR yes 13298199 2027 114044597
chr11 13300230 13300239 THAP1 JASPAR yes 13298199 2031 114044598
chr11 13300233 13300237 LFA1 TRANSFAC yes 13298199 2034 114044599
chr11 13300233 13300245 NHLH1 JASPAR yes 13298199 2034 114044600
chr11 13300234 13300243 SNAI2 JASPAR yes 13298199 2035 114044601
chr11 13300234 13300244 ID4 JASPAR yes 13298199 2035 114044602
chr11 13300234 13300244 NHLH1 JASPAR yes 13298199 2035 114044603
chr11 13300234 13300244 TCF3 JASPAR yes 13298199 2035 114044604
chr11 13300234 13300244 TCF4 JASPAR yes 13298199 2035 114044605
chr11 13300236 13300245 ZEB1 JASPAR yes 13298199 2037 114044606
chr11 13300239 13300563 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 13298199 2040 107959807
chr11 13300252 13300257 TFAP2A TRANSFAC yes 13298199 2053 114044607
chr11 13300252 13300258 MZF1 JASPAR yes 13298199 2053 114044608
chr11 13300262 13300271 TFAP2A JASPAR yes 13298199 2063 114044609
chr11 13300276 13300796 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 13298199 2077 107959808
SNPs associated with ARNTL[ENSG00000133794.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 12547401 rs12366151 G A 750798 Esophagus 0.247768 1857737
chr11 12430726 rs1426588 T C,G 867473 Esophagus 0.0323373 1856689
chr11 13133415 rs12804110 A C 164784 Heart 0.0753189 1862885
chr11 13363892 rs962678 C G 0 Heart 0.385116 1864913
chr11 12912355 rs150032404 A G 385844 Pancreas 0.0955102 1861258
chr11 13115585 rs1899300 C A,T 182614 Thyroid 0.247829 1862598
chr11 12441070 rs10734196 C T 857129 Lung 0.216943 1856850
chr11 12441070 rs10734196 C T 857129 Adrenal 0.370453 1856850
Details of ARNTL[ENSG00000133794.13]
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Genomic Location chr11:13298199-13408813[+]
TSS 13298199
Gene Name ARNTL
Ensembl ID ENSG00000133794.13
ENTREZID 406
Uniprot
B2RCL8
O00327
A0A140VKD3
Protein Name
Aryl hydrocarbon receptor nuclear translocator-like protein 1
Expression levels of ARNTL[ENSG00000133794.13]
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