EnhancerDB
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Enhancers that regulate VTCN1[ENSG00000134258.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 117649425 117653575 enh110653 117753556 99981
Cervix (HeLa-S3)
chr1 117675273 117682303 enh67113 117753556 71253
Neural Stem Cells (H9)
chr1 117702605 117714735 enh27108 117753556 38821
Prostate (PC-3) Astrocyte Muscle (A673) Lung (PC-9) Pancreas Stomach
chr1 117719445 117727975 enh12193 117753556 25581
Epithelial (MCF-7) Brain (SK-N-MC) Ovary Placenta Lung (PC-9) Stomach
chr1 117765885 117771235 enh79195 117753556 12329
Prostate (PC-3) Epithelial (MCF-7)
chr1 117772125 117789895 enh12194 117753556 18569
Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Esophagus Lung Stomach Placenta Thyroid Lung (PC-9) Pancreas Spleen Uterus Heart
chr1 117801485 117807895 enh12195 117753556 47929
Placenta Peripheral Blood (MM.1S)
chr1 117807945 117819995 enh12196 117753556 54389
Prostate (PC-3) Cervix (HeLa-S3) Placenta Thyroid Uterus Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 117814674 117814878 vista3096 117753556 61118
VISTA
chr1 117824185 117829475 enh67114 117753556 70629
Prostate (PC-3) Neural Stem Cells (H9)
chr1 117830285 117834435 enh49956 117753556 76729
Large Intestine
Transcript facotrs that regulate VTCN1[ENSG00000134258.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with VTCN1[ENSG00000134258.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 117673544 rs191801777 C T 12665 Esophagus 0.312298 593922
chr1 117671894 rs57958069 T TC 14315 Heart 4.91627e-05 593908
chr1 117781852 rs17036976 T A,C 28296 Uterus 0.240277 594598
chr1 118230221 rs7529522 T C 476665 Liver 0.3444 597228
chr1 117930095 rs1774853 T C 176539 Lung 0.321424 595551
chr1 117033646 rs17035864 A C 652563 Stomach 0.436281 589202
Details of VTCN1[ENSG00000134258.12]
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Genomic Location chr1:117686209-117753556[-]
TSS 117753556
Gene Name VTCN1
Ensembl ID ENSG00000134258.12
ENTREZID 79679
Uniprot
Q7Z7D3
Protein Name
V-set domain-containing T-cell activation inhibitor 1
Expression levels of VTCN1[ENSG00000134258.12]
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